Crassostrea virginica (eastern oyster): 111118386
Help
Entry
111118386 CDS
T09197
Name
(RefSeq) PDZ and LIM domain protein 3-like isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
111118386
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cvn04990
]
111118386
Domain-containing proteins not elsewhere classified [BR:
cvn04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
111118386
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
LIM
DUF4749
PDZ_6
PDZ_2
HMA
Motif
Other DBs
NCBI-GeneID:
111118386
NCBI-ProteinID:
XP_022313540
UniProt:
A0A8B8CCY0
LinkDB
All DBs
Position
2:41328213..41334712
Genome browser
AA seq
382 aa
AA seq
DB search
MSNLEYQPAETLTVQLLRPDQGVSWGFRLQGGVDFSTPLSIQSVNPGSVAERSGLLAGDG
ILYINNTNADGLSHEQAKMEIIRAGNAITIAVQRGAVKIWKPKVTPMSDLRPAQMNTIKT
ATGDEVQTMQKTSLTRENQPEPLNIGSSYNRSGKPFTPQQQVQSPKQAVPNVVHAQFNSP
IGLYSANNIADTYAAQTAGIQQQMHDLDVTRSPVGAKMSGTYQPLEGEEASDDAVPVVSS
EADDVTPVTSDNPLSCDSQNSSSNQPESTSQNDTNSHDANESKLNRPSGFRSVRAPDPVE
PSRSKPAQENMHCGDCNMLVTGVFVRVKGVPYHPQCFKCTSCGVNLKQKGYFVVDGRLFC
EVHAKQIAQPPGPNMKAVPVYR
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatctggagtaccagcccgccgaaaccctcaccgtgcaactcctccggcccgac
caaggggtctcatgggggttccgtctccagggaggagtcgacttcagtacccccctctcc
attcagtcggtaaaccccggcagtgtggctgagcgcagtggcttgctggcgggagatggc
attctctacatcaacaacaccaacgctgacggtctgtcacacgaacaggccaagatggag
attatcagagcaggcaatgccatcaccattgcagttcaaagaggtgcagtcaaaatttgg
aaacccaaagtgacccccatgtctgaccttcgacctgctcagatgaacaccattaaaaca
gccacaggggatgaagtacaaacaatgcagaaaacttcactaactcgtgaaaatcaacct
gaacctttgaacattggtagcagctacaaccgatcagggaaacccttcaccccacaacag
caagttcagtcccctaagcaggctgtgcctaatgtggtccatgcacagttcaactcgcct
attggtctgtattcagccaacaacatcgcagacacatatgcggcacagacagcaggaatt
caacagcaaatgcatgatttagatgtcacaagaagtcctgtaggtgccaagatgagtggt
acctaccaacctctggaaggtgaagaagcatctgatgatgctgtgcctgttgtgagctct
gaagctgatgatgtgacccctgtgacctctgacaatccgctgtcatgtgactcccaaaat
tcatcttctaaccaaccagaatccacctcacaaaatgatactaattcgcatgatgcaaat
gaatctaagctcaatagaccatcagggttccgatctgtgagagcgcctgatccagtggag
ccttcccgttccaaacctgcccaggagaatatgcactgtggggactgcaacatgctagtc
acgggtgtttttgtaagggtgaaaggggtgccataccacccacagtgtttcaaatgtact
tcctgtggagtgaatttaaagcaaaaaggttactttgtggtggatggtagactattctgt
gaagttcatgccaaacaaattgcccagcctcctggtccaaacatgaaggccgtccctgtg
taccgctga
DBGET
integrated database retrieval system
