Crassostrea virginica (eastern oyster): 111118493
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Entry
111118493 CDS
T09197
Name
(RefSeq) LOW QUALITY PROTEIN: paired box protein Pax-2-B-like
KO
K15608
paired box protein 2
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvn03000
]
111118493
04131 Membrane trafficking [BR:
cvn04131
]
111118493
03036 Chromosome and associated proteins [BR:
cvn03036
]
111118493
Transcription factors [BR:
cvn03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
111118493
Membrane trafficking [BR:
cvn04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
111118493
Chromosome and associated proteins [BR:
cvn03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
111118493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
HTH_23
HTH_32
DUF6115
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
111118493
NCBI-ProteinID:
XP_022313707
UniProt:
A0A8B8CD57
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All DBs
Position
2:complement(3569782..3614271)
Genome browser
AA seq
597 aa
AA seq
DB search
MEAAPEQDLTPEEHDEATAQPTIITLIPVAQEEIPTMPEMSQPSETNNNTIVTNAVVINN
DGSAKVVGKEEFGQFNGNGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQ
LRVSHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDAITRYKHENPTMFAWEIRDR
LLAEGVCTSENVPSVSSINRIVRNKAAENAKQSPGHTSPSLDTGSPPLSHQPSPNSEIQR
APYTITGILGIPQSQTAQTMVDPNGNKRKREDQVPNGHEAEVKIEPNTADMNIWYQAQPR
PTKQPRSENGTADAQGMPQTLIINNAQMYPAGIPTNLPPNYNAHFVTTTTSISGEVIKPQ
VGVEYTIASPAIGTVANSESHSTTTNYASTLGHQLGTEXSVNAQTQDLKPIVVAVATDAQ
SPAQQEQFQEATNNTPTSSSTPTINNNNNTPPPKAGSPSSGGGSNNLTELKPVQPTMSQS
YTPLPSFSGQFSSQASSFNGSHVTFPSQAVVGTVVQPLVISSGSYNTANPPSGEYYNAAG
XPYTQYQTATYPADPAWTMRYSTPTGVLNTPYYYQAPVSGRTEANTTVAASASPSKS
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggctcctgaacaggacctaacccccgaggagcatgacgaagccactgctcaa
ccgaccatcatcaccctcatccccgtcgcacaagaggagatcccaaccatgcctgaaatg
tcccaacccagcgagaccaacaacaacacgattgtaacgaacgcagttgttattaataac
gacggctcggccaaagttgttggaaaagaggaatttggccagttcaacggaaatggtcat
ggcggcgtgaatcagctgggaggggtgttcgtcaatggccgtcccctgcccgacgtggtc
cggcagaggatcgtggaattggcccaccaaggggtcaggccgtgtgatatctcccgccaa
ctcagggtctctcatggctgcgtcagcaaaatactcggaagatattatgagacgggctcc
atcaagccgggcgtcatcggcggatccaagcctaaagtggcgactcctaaagtggtggat
gccatcacccgctacaagcacgaaaaccccaccatgtttgcctgggagatccgggatcga
ctcctagcggagggggtgtgtacctccgaaaacgtgcccagtgttagctcaatcaacaga
attgtaaggaacaaagcagcagaaaatgcgaaacaatctcccggacatacaagtccctcc
ctcgacaccggaagtccgccattgtcccatcaaccatcgccgaacagcgaaattcagaga
gctccgtacacaatcacggggattctgggaatcccccagagccagaccgctcaaactatg
gtggacccgaacggaaacaaaaggaaaagggaagatcaagtaccaaatggtcatgaagct
gaagtaaaaatagagccaaatacagcagacatgaacatatggtaccaagcccaacccaga
ccaacgaaacaacccagatccgaaaatggaacagcggatgcccaaggcatgccccaaact
ctgataataaacaatgcacaaatgtaccccgcgggaatacccacgaatcttcctccaaac
tataatgctcattttgttaccacaacgacatccatttccggggaagttataaaaccccaa
gtcggagtcgagtataccatcgcatctccggcaatcggcaccgtggccaactccgaatct
catagcacaaccactaactatgcttcaacactaggtcaccaacttggaacagaanatagt
gtaaatgcgcagactcaggatttgaaaccaattgtggttgccgtggcaacggacgcacag
tcacccgcgcaacaagaacaatttcaagaagcaaccaacaacacaccaacttcatcatca
acaccaaccatcaacaataataacaacacccctccccccaaggcgggctcccccagctca
gggggtgggtctaacaacctgacagagcttaagcccgttcagcccactatgtcccaatcc
tacacaccgttgccgtcgttttcgggacaattttcaagtcaagctagcagttttaatggc
tcacacgtcacgtttcccagtcaagcagtcgttggcaccgttgtacaaccactagtaata
tccagcggatcttataacactgcaaacccacccagtggagagtactataacgccgccgga
nacccctacacccagtaccagacagcgacctaccccgcagaccctgcctggacaatgaga
tactccacccccacaggtgtgcttaatacgccatactattaccaagcacctgtctccggc
aggaccgaagcaaacacgacggtggccgcctcagcaagtccttccaaatcataa
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