Crassostrea virginica (eastern oyster): 111118544
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Entry
111118544 CDS
T09197
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1-like
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cvn04040
]
111118544
Ion channels [BR:
cvn04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
111118544
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GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
ANK_LRRK2
Ank_KRIT1
Ion_trans
CarA_N
Motif
Other DBs
NCBI-GeneID:
111118544
NCBI-ProteinID:
XP_022313770
UniProt:
A0A8B8CDL4
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Position
2:59073336..59099884
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AA seq
1154 aa
AA seq
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MMEGEEHERQGGTPVITINGRAGTEEDSDDGKDRRSPNDRFNEDNSIQLESPSKRRLHLV
VGASTIYPAYRKGERMPEETGTDKTVWQAIRDCSIKELDWLLTTQPEVTKETDYHGNTLL
LIAAKYNLVESARVLISHGVDVNEKNRHDGIAPLHEASKYGSADVGRLLIESGCDVMIRD
NRQKTPLHHASRRGRDKIVEHLVQSNKCDIDARDEDKLTPLHESIIQKHENTAMLLIKSG
ADVTKTEINGSTPYMLAAAVELVGVMETIRKTVLKQSGESSVRTMVNQRDSWGNSALHVA
VDNKCLRAVEEILTNAGDVNATNETGLTPLHSSAINGDLDIAVTLLSHEAAVNVRDQDSF
TPVHRACLFNRHEVLNALMKKGGDINMKTKDGMTPLILACSKGLLETVDFLLNNGAQISQ
ADNLMRNALHWAVENAHLEVLLYLLKKSDSVMLEAMDHQEQTIMHYAAKLGNVAILQALI
HQGCTLDTRDMEGRTPLHVAAEHDNEAAVEVLYHASNSELNDGDGDGQTPLLMAVKEGHY
NSVKVLLSLGADIANRDENLCSVLHIAAREGHVKIMKVLLEHYADINATDKIKNTPLHTA
CKEGHVDCVQLLLDRNANSLARNIFKKTPLDVTLENRHSDVAVTFMKSKRWEEIIENRDP
DGKTAVDEMIQNCPEAVTVIMDNCIESTGDFPDSIDYTQKLDFRFIDPGPDDVMCKRQRY
FAFETMVRCNREDLLTHPLVQQCLLLKWRTFGRPVYFFDVTLFLLYLTIINIYCISMPKI
STNLLDNVRRCPIFLDASMASNQTIVNYFIQNGQTANYSIESEEFNILIASLSCVLLIFY
IREVISIYSRRLRYLLNPFTYVTLVMLTGTSATLYPIGFIPCESQWRAAWIATLAAWISL
ISIMRALDVVGIYFVMLEQVFHSLLKIGVVLGVFLLAFSQAFYITMAQTPGFQQDQPYPA
TVLSMTLGELNFIDNFLSGTDQAFYIDNLVLFSLFALIMPISLMNLLIGVAVGDIDAVQK
KAYLTRLGIQIDFLCNVEKTFPKYFQRKFHKISHKVTPNINMNSRFNRFYKFVFGERRNN
AAFISQEQDFVTETVHQLKDEVKATRQQMAQTAALQKQSLELIKQLCDQLQVSYTLDNIS
LAESNRPATRGRPR
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgatggagggagaggagcacgagagacagggaggcacacccgtgatcacgatcaacggc
agggcggggaccgaggaggattctgacgacggaaaggaccggagatccccgaacgacagg
ttcaatgaggacaattccattcagctggaatcgccatccaaacgcaggctccatctggtg
gtgggggcctccacgatataccccgcttacaggaaaggggagagaatgccggaggaaaca
gggacagataagactgtgtggcaggctattagagactgcagtataaaggaactggactgg
ttactgactactcaaccggaagtgacgaaggaaacagactaccatggaaacaccctgctt
ttgattgctgccaagtacaacctggtagagtcggcccgtgtgttgatctctcatggagtc
gatgtgaatgagaaaaacagacatgatgggattgcccctctacacgaagcatccaagtat
ggatccgcagatgtcggtcgtctcctgatagaatccggatgtgacgtcatgattcgtgac
aaccgccaaaagacaccattgcatcatgcgtctagaagaggtcgagacaagattgttgag
catcttgtgcagtcgaacaagtgcgacatcgatgccagagacgaagacaaactgactcca
ctgcacgagtccatcatacagaagcacgaaaacacagcaatgctgctgattaaaagtgga
gcggacgtgacaaagactgagatcaatggatccaccccttacatgttggctgctgctgta
gagctggtcggtgtcatggaaacgatacggaaaacagtactaaaacaaagcggggaatct
agtgtcagaacgatggtcaaccagcgagactcctggggaaactccgctctgcacgtggct
gtagacaacaaatgtctgagggctgttgaagaaatcctgactaacgctggcgatgtcaat
gcaacaaatgaaactggtcttacaccgctacattcgtcagcgataaacggtgaccttgac
attgcagtgaccttgctatcccatgaagcagcagtcaacgtgagggatcaagattcattc
actcccgtacacagagcttgtttgttcaatcgacatgaagtactgaatgcacttatgaaa
aagggtggagacataaacatgaaaaccaaggatggaatgacgccattgatcttggcctgc
tcaaaaggtcttttagagacagtggatttcctgttaaacaatggggcgcagatttcccag
gcagataatctgatgagaaatgcactgcattgggccgtggaaaatgcccatttggaagtc
cttttgtaccttcttaagaaaagcgacagtgttatgctggaagcaatggatcatcaggaa
cagaccatcatgcattatgcagcaaaactaggaaatgtagcgattctacaggccttgatc
catcaggggtgcacgctggacaccagagacatggaaggtcgcacccctctccacgtggcc
gcggaacacgataacgaggctgcagtggaggtgttgtatcacgcgagtaattccgagctg
aatgacggggacggcgacggacagacgcccttactgatggcggtcaaggaggggcactac
aacagcgtgaaagtcctgctgtcactgggggcagatatcgccaacagagatgagaacctt
tgctctgttctccatattgccgcgagggaaggtcacgtcaagatcatgaaggtcctgctg
gaacattacgctgatattaacgcaacagataaaatcaagaacactccgctccatacggct
tgcaaagagggccatgtagactgtgttcaactgctactggacagaaatgcaaactcactc
gctaggaacatctttaagaaaactcctctggatgtcaccttagaaaacagacattctgac
gtagcggtgacgttcatgaaatccaaacgatgggaagaaataatcgaaaatcgggaccct
gatggtaaaacggctgtggacgaaatgatacaaaactgtccggaagcagttacggtcata
atggataactgtatagaatccacgggggacttcccggatagcatcgattacacccagaaa
ctggacttccggtttattgaccccgggccagatgatgtcatgtgcaaacgacagagatat
tttgcatttgagacaatggtgagatgcaacagagaggatctgcttacccatcctctcgtt
cagcagtgcttgttgttaaaatggaggacgtttgggcgccccgtgtatttctttgacgtc
acactattcttgttgtatctgactatcattaacatctactgcatttcaatgccgaagatc
tctaccaacctactggacaacgtcaggaggtgccctatattcctggacgcttctatggcc
agtaaccaaacgatagtcaactatttcattcagaatggccagacagctaactattccatt
gagtctgaagagttcaatatcctcatagcgtcattatcatgtgtcctattaattttctac
atcagggaggtcatcagcatatattcaaggcgcttacggtacctacttaatccgttcacc
tacgtgaccctggtgatgttgactggcacgtctgcaaccttgtaccctattggcttcatc
ccttgtgagtcgcagtggcgggctgcctggatcgccacgcttgctgcctggatcagcttg
atatccatcatgagagcattggacgtggtcggaatatactttgtcatgttggagcaagtt
ttccactctctactcaagatcggtgtcgtgctaggagtttttctccttgctttttctcag
gcgttttacataactatggcacaaacacccggcttccagcaagatcagccctaccctgcc
accgttctctccatgaccctgggggaactgaacttcattgacaactttctgagcggcaca
gaccaggctttttacatcgacaacctcgtcctcttcagtctcttcgctctcatcatgccc
atttcgctgatgaacctgttgatcggtgtagctgtgggtgacattgatgctgttcagaag
aaagcttacctgaccaggctaggcattcagatcgactttttatgcaatgttgaaaagaca
tttccaaagtattttcaaagaaagtttcataagataagccacaaagttactccaaatatc
aacatgaattccagatttaataggttctacaagtttgtgttcggtgagcgacgcaacaat
gccgcattcataagtcaagaacaagatttcgtaacagagacagtccaccagctaaaagac
gaagtcaaagccaccagacaacaaatggcgcagactgcggcgcttcagaagcagtccctg
gagctgatcaaacagctgtgtgaccagttacaggtctcctacaccctggacaacatctcg
ctagccgagtccaatagaccggcgacccgcggaagacccagataa
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