Crassostrea virginica (eastern oyster): 111118550
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Entry
111118550 CDS
T09197
Name
(RefSeq) AP-5 complex subunit zeta-1-like isoform X1
KO
K19025
AP-5 complex subunit zeta-1
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvn03400
]
111118550
DNA repair and recombination proteins [BR:
cvn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
111118550
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TPR_AP5Z1_C
TPR_AP5Z1
SPG48
Motif
Other DBs
NCBI-GeneID:
111118550
NCBI-ProteinID:
XP_022313777
UniProt:
A0A8B8CDC6
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Position
2:complement(17015782..17028555)
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AA seq
799 aa
AA seq
DB search
MALSMIESLFSQASITPQEEIDKICQGVLENLYAPDKSNECMNQLRQLYFILQASHTEPC
LPRNMISTLVNMVSSMDHDKTKECLLCEQILSELLPRNQDDLGSDFYPSSSHQKGTSSAN
CLLLYLMQGNRNCCLVDVIPHAVRWMSSGKEDYNVQRQAFSFLVSLQVLHNKLVTEETMK
TVNTTASNWLMNASLYQLPNPYTINPFKKDQTPVVNEVDGTPSRNFFTVLNIGQYYTNDQ
FLNIYCFSMLYKWLYHARFNSEEVSDNVSKSAQVFNSLVDKSIDYCFRILDQCERKPKVP
SDTELQNCCLLEVVNILDMICKIEPGKVAGVFQEIRRLYNKLMQELDKPRLLVPILQFFL
NHGKTPHLHGKFYGNTPLLPNKGKSVEHDPQEAYTLFFHKLLTQWYLDPAFSFDTITFIK
DNLDTLCHNTSILSTYFPNILKMLAWNPRSYLADFEDILPALMSPSTAIEVFHMLLDLPC
VTVALEITERCKKSEIQTLSSETEPTNSLSAFQSPLYRPMFNFFTRVEGGHGDTINRLSL
FHNILADMNQHPRVLVCSQIVPVLLRVWFDVILEGASSEFLSHLIPVLLERTAMLYNIPG
YQADVRKVLAEYVVHLLKKYPGILLDQASEIRDFLSSPRNISDREEFFANLVWCVGELCS
VRHDDRCTAEAITRFFDTLEVLTYELSGMASAKEEISNSSKIICMLISAISKLASKCQDL
IPRSILLLTKVAKQQQASYLDTETKDALVGRAQELINLLKLPNFANVVLNPSDEIETGRW
HRDNTSLPITLRGIQHILS
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggcgctctccatgatagaaagtctattttcacaagcaagtataactcctcaagaagaa
attgacaagatttgccaaggcgttctcgagaacttatatgcacctgataaatctaatgaa
tgtatgaatcagctgaggcaactttatttcattcttcaggcttcacacactgaaccatgt
ttaccaagaaacatgatatcaacattggttaacatggtgagttcaatggaccatgacaaa
accaaagaatgtctcctctgtgaacagatcctgtctgagcttttacccaggaatcaggat
gacctggggtcagatttttatccaagctcaagtcatcaaaagggtacatcctcagccaac
tgtcttttactttatttgatgcagggaaacagaaattgttgtctggttgatgtcattcca
catgctgtaaggtggatgtcctccgggaaggaggactacaatgttcagcgacaggcattc
tccttccttgtgtctcttcaggttctgcacaacaaactggtaactgaagagactatgaag
acagtgaacaccacagctagcaactggttgatgaatgcctctctttaccagctgccaaat
ccttacacaatcaacccgttcaaaaaggaccagacccctgttgtgaatgaagttgatgga
acacctagtagaaattttttcaccgtacttaatattggtcaatattacacaaatgaccag
tttctgaatatatactgcttttctatgttgtacaaatggctgtatcatgcaagattcaat
agtgaggaggtttcagacaatgtcagcaaaagtgctcaagtatttaacagtctggtagac
aagtccattgattactgcttccgaattttagaccagtgtgaaagaaaacccaaagttcca
tcggacacagaactgcaaaactgttgccttttggaagttgtgaatattttggacatgatt
tgtaagattgaaccagggaaggttgctggagtgttccaggaaatccgccgtttgtataac
aaactgatgcaggaattggataaacctcgacttcttgttccaattctacaattcttcctt
aaccatggtaaaacaccacacctccatggtaaattctatgggaatacaccgttactacca
aataaaggtaagagtgtggagcatgacccccaggaggcttataccctcttcttccacaag
ctcttgactcagtggtacttggacccagccttcagctttgacaccatcaccttcatcaaa
gacaacttagacactctctgtcacaacacctccatactgtccacgtatttccccaacatc
ttgaagatgttggcttggaatcccagatcatatctggcagattttgaagatattctacca
gcactgatgtctccaagcacagcaatagaggttttccacatgcttcttgatttgccctgt
gtcacagttgccttagaaatcactgagcgttgcaagaagagtgagattcagaccttatcc
agtgaaacagagccgaccaattcactttcagcattccagagccccctctacaggccaatg
tttaacttcttcacgcgtgtggagggagggcatggtgacactatcaatagattgtccctc
tttcacaacattctggcagacatgaatcaacatcctcgcgtactagtgtgctctcagatt
gtacctgttttactgagggtgtggtttgatgtaatactggaaggtgcttcctctgagttt
ttgagccatttgattcctgttcttctggagaggacggccatgttgtacaatattcctggt
tatcaagcagacgtccgaaaagtgttggctgagtatgtggttcaccttctcaagaaatat
ccaggaatactactggatcaggcctcagaaatccgagatttcctgagcagccccaggaat
atatctgacagagaggaattctttgcaaatttggtctggtgtgtgggtgagctgtgctca
gtcaggcatgatgacagatgcacagcagaggcaatcaccagattttttgatacgcttgag
gtgctgacatacgagctctcaggaatggcttcagcgaaagaggaaatttctaattcatca
aagattatatgcatgttaatatctgccatctcaaagctggcttccaagtgtcaagatttg
attcctcggtcaatcttgcttttgaccaaagttgctaagcaacaacaagctagctacttg
gatacagaaaccaaagatgcattggttggcagagcacaggaattgatcaacctcctgaaa
cttccaaattttgccaatgttgtgttgaaccccagtgatgagatagagactggcagatgg
cacagggacaacacaagcttaccaatcactctccgaggcattcagcacattttgtcatag
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