Crassostrea virginica (eastern oyster): 111118652
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Entry
111118652 CDS
T09197
Name
(RefSeq) cysteine--tRNA ligase, cytoplasmic-like isoform X1
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
111118652
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cvn01007
]
111118652
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cvn03016
]
111118652
Enzymes [BR:
cvn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
111118652
Amino acid related enzymes [BR:
cvn01007
]
Aminoacyl-tRNA synthetase
Class I (G)
111118652
Transfer RNA biogenesis [BR:
cvn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
111118652
Prokaryotic type
111118652
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
tRNA-synt_1
DALR_2
Nab2
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
111118652
NCBI-ProteinID:
XP_022313921
UniProt:
A0A8B8CHE6
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Position
1:complement(52687879..52749705)
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AA seq
776 aa
AA seq
DB search
MAIIRSVVCGILQQSQLTSGTSTSLRFFHASTFFFNNNSLRRLKEKMASRSKNVQPPWSV
PEGTEVPKLKLYNSLTRQKEVFVPQNGRRVLWYSCGPTVYDSSHMGHARSYISIDILRRV
LQNYFNYEVFYCMNITDIDDKIIKRARQNYLYEQYQSKNLAVSKILEDLESALKPFVVKL
EKEEDPDKKALYVKIKAKVEKALAEVKAGQEDGQSRERLYVDGKDVLCDWLDKTHGSEVT
DNSIFAKLPQFFEEDYHKDMESLNVLPADVLTRVSEYVPEIVEYIKKIINNGFGYESNGS
VYFNTSAFDAAEGHSYAKIVPEAYGDKAALNEGEGELSVSAERQEEKKNPTDFALWKASK
PGEPSWESPWGMGRPGWHIECSVMASSIQGESLDIHTGGFDLRFPHHDNELAQAEAYYDN
DHWVRYFLHAGHLTIEGCKMSKSLKNFITIKDALKKHTARQLRLLFLLHQWKDTLDYGEN
SMEIAIRYEKMVNEFFLNVKNLLRTTPGTGIAAFEKWGDEDVQLNQKYLQTKDSVHEALC
DNVNTRTALELLRELIGEVNIYMASARSTDRTPNRMILKNIATYITLLFKVFGAIETDEE
IGFPQSSSQSVNVEETVMPFLTAFAQFREDVRNISREQKATELLKLCDQLRDDVLPNLGV
RLEDGISPPTIKLVDRETLMKEREEKLKKEELKRLEKEKKKQEMEAKLAQEKIPPWELFK
KETDKYSQFDDKGLPTHDAEGKELSKGQIKKLTKLYEKQEKTYNKHMGTTGSEGGS
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atggccattattagatcagtagtctgtgggattctacaacagtctcagctgaccagtggt
acttccacatctctgcgatttttccacgcttcgactttctttttcaataacaacagttta
aggagactaaaagaaaaaatggcttccaggtccaagaatgtccagcctccatggagcgtc
cctgaaggaacagaggtcccaaagttaaagctgtacaacagtctgaccagacagaaggaa
gtgtttgtccctcagaatgggcgccgagtcctgtggtacagctgtggccccacagtgtat
gattcctctcacatgggtcacgcccgctcgtacatttccattgacattctgcggcgagtg
ctacagaactacttcaactacgaggtcttctactgcatgaacattacagacattgatgac
aagattatcaaaagagctcgtcagaactacctgtatgaacagtaccagagcaagaacctg
gccgtttccaagatactggaagacttggaatcggctctgaagccatttgttgtcaaactg
gagaaagaggaagatccagacaagaaagccctgtacgtcaaaatcaaggccaaagtggag
aaagctttggcagaagtcaaggcaggtcaggaggacggtcaaagcagagagaggctgtat
gtagatgggaaggatgtgctgtgtgattggttggataagactcatgggtcagaggtcact
gataactccatatttgccaaacttccacagttttttgaggaggactatcacaaagatatg
gagtctctgaatgtgttgccagcagacgtcctcactcgcgtcagtgaatacgtcccagaa
attgtggagtacatcaagaaaatcatcaacaatggctttggatacgagtccaatggatct
gtgtattttaacacttctgcctttgatgcagcggagggacacagctatgccaagattgtc
cccgaggcttacggggacaaagcagcccttaatgagggagaaggtgaactgagcgtttct
gctgagcgacaggaagagaagaagaacccgacagactttgccctttggaaggcctccaag
cctggagaaccttcctgggaatcaccctggggaatggggcgcccgggctggcatatcgag
tgctccgtgatggccagcagcatccagggagaatccctagacatccacaccgggggattt
gatctccgattccctcaccatgacaacgagcttgctcaggccgaggcgtattacgacaat
gaccactgggtgaggtatttcctgcacgccggtcacctgaccattgaaggctgcaagatg
tccaagtccctgaagaacttcatcaccatcaaggacgcgctgaagaagcacacggcgcgg
cagctgaggttgctcttcctgctccatcagtggaaagacacactggactacggcgagaac
agcatggagatcgccatccgatacgaaaagatggtcaatgaatttttcctgaatgtgaag
aatctgctgagaactacaccagggactgggatagcggcattcgagaaatggggagatgaa
gacgtacagcttaatcagaagtacctgcagacaaaagattcagttcatgaagctctgtgt
gataacgtcaacaccaggactgccctggaactcctgagggagctgatcggggaggtgaac
atatacatggcatccgcccgctccacagaccgaacccccaacagaatgatcctcaagaac
atcgccacctacatcaccttactgttcaaggtgtttggagccattgagacagacgaagag
atcggcttccctcagtcctcatcccagagtgtcaatgttgaggagactgtgatgcctttc
ctcacagccttcgctcaattcagagaggatgttagaaacatatcaagagaacagaaagcc
acggaacttctgaagctctgtgaccaactgagagatgacgtcttgccgaatctaggggtg
aggttagaggatggaatatcccctcccaccatcaaactggtggaccgcgagaccctgatg
aaggagagggaggaaaaactcaagaaagaggaattaaagaggctagaaaaagagaaaaag
aaacaggaaatggaggcaaagttagctcaagagaaaattccaccctgggaacttttcaag
aaagaaactgataaatattcacagtttgatgacaagggcctccccacacatgatgctgag
ggtaaagagttgtccaaaggacagataaagaagctgaccaagctgtacgagaagcaggag
aagacctacaacaagcacatgggcaccacagggagtgagggcgggtcctaa
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