Crassostrea virginica (eastern oyster): 111118731
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Entry
111118731 CDS
T09197
Name
(RefSeq) protein transport protein Sec24A-like isoform X1
KO
K14007
protein transport protein SEC24
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111118731
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvn04131
]
111118731
Membrane trafficking [BR:
cvn04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
111118731
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
111118731
NCBI-ProteinID:
XP_022314037
UniProt:
A0A8B8CE28
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All DBs
Position
2:complement(43561226..43574491)
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AA seq
1401 aa
AA seq
DB search
MADQHREYKPSPNGPQNPTPYAQSMPMGPPGGMQAKYLQGQNMSRPPAPYNLTGNVPNNG
VSSGYKASLNGHGTPPPMNKPPVQRMPPPGGSPANRFPPPMMNVTAPPMMNVPASSQTFV
NGPMTSPYNPNSSLASGVPPHSLSSSGSFPGGISSSPAPGMPRSSSANAMNSFSVSQTSS
HSNSPIPPVFSAQSPGSMLDQRSVSQPRTDTPPTEGGLPVPFHGQGQYSHQVGMSLTPGL
TPNNSEPTSTRTSRTSSPVETQAFDALEGGDLSNSQNQSFPGVSDDNQGQQKQNSPRTSN
VFNQGNFNRGSPVTQGNPSTAIGGPPSSMTPTLVTGQGVPPHSYQSQPAPQGSMTTQPGM
SPMGIPPRMGTPTSYGGQPPRPQGPPQPGYGPQGMGVPRSTAPPMGGQRPMGTPRPPTGT
QPNFYSPHSMGGPPTTSGVYTSMSSPSFSGQQGMPSSSMQGMFPPTSYGGQQSPAGGPPL
PGVGAGPPIGPTGAPPMRPAMPSVPSSTAPPGMPPMSRPGPVPPGPTGYPQPPGMYPVAS
GAPPTSFGTTQPPPAGYPTQTQPGRIGPTPTRPKYPQMPATSFSTGQSQNPNPSQFPPPG
GYQPNAQPPGSNQMGGGGQGGMPSQAPGGFPMATQQPGGLSASFGSMSMQDRAVNLLNEK
NLLPPEGLEVVKPRLNNEFKKVNCQPDVFRCTLTAIPQTSSLLNKARLPLGILIHPFKDL
SNAVEQLPVIQSSVIVRCRSCRTYINPFVFFVDSRRWKCNLCYRVNELPDEFAYDPVTKT
YGEPQRRPEIKSSTIEFIAPSDYMLRPPQPAVYLFLLDVSFNAVETGYLNIFCNMLMEEL
DKLPGDSRTQIGFIAYDRALHFFNLAEGLSQPQMLTVSDIDDIFLPCPDNLLVNLQESKE
LVLDLLGQIPVLFEDNLETGSALGSALQAAHKLVGPVGGRVTIMQTVLPTAGPGALQSRE
DASLRMGKNVTNLGPATDFYKKLALECSAQQVAVDLFMLNGQYTDIATISCVSKYSGGSV
YHFPLFHAAKNPALTEKYEADLRRYLTRKIGFEAVMRIRCTKGLSIHTFHGNFFVRSTDL
LSLPNVNPDAGFGMQMSIEDSLVDTNTVCFQAALLYTSSKGERRIRVHTLCLPVTNQLSD
IYAGADQQAIIGLLAKMGVDRSVTSSLPDAREAMINAAMDSLASFGNTIPPAQRIGSLPI
CFTLRMLPTFILALLKSKAFRVGMNTPLDDRVFAMQQCKSLPVGQLIKTLYPDLYPIHGI
QSFDTEKKGDIVVPKPPRLHLSSANIDRTGVYLLDALDSIYLYVGSAAPQDFIQEVLDAP
NFTSIPDGMIDLPELENEKSELVRNFITDLLDNRPGGACFYVIRDDSKRRLQFFEHMVED
RSESSMSLYEFLQHLQKQIKS
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcaacacagagagtacaagcctagtccaaatggaccacagaatcctactccc
tacgcacaatcgatgcccatgggtcctccaggtggaatgcaagccaaatatttacaagga
cagaacatgagtcgacctccagcaccatacaatcttacaggaaatgttcccaacaatggc
gtatcatcgggatacaaagcttctctgaatggacatggtactccccctcccatgaataaa
ccgccagtacaaagaatgccacctccaggaggatcgccagctaataggtttccaccacca
atgatgaatgtgacagcaccaccaatgatgaatgtgcctgcctcgtcacaaacatttgtg
aatggtccaatgaccagtccttataatccaaactcttcactagcatctggagtacctcca
cattctctttcctcatctggaagttttccgggcggaatttcctcttcacctgccccagga
atgccacgttctagttcagctaatgcaatgaactctttcagtgtcagtcagacttcctct
cattcaaatagtccaattccccctgttttttctgctcaatccccaggcagtatgttggat
cagagatctgtttctcaaccgagaactgataccccaccaacagagggaggtctgcctgtt
ccttttcatggacaaggtcaatattctcaccaagtgggcatgtctttaactcccggatta
actcctaacaattcagaaccgacatccacccgaacatctagaacttcttctcctgtagaa
acacaagcgtttgatgcattagaagggggagacctctccaacagtcaaaatcaaagcttt
cctggtgttagtgatgataaccaaggtcaacagaagcagaattctccaaggacaagtaat
gtttttaaccagggaaacttcaacaggggatctcctgttacccaagggaatccctcaact
gccattgggggtccaccctcatcaatgacgccaacactggtgacaggacaaggtgttcca
cctcattcttaccaaagccaaccagcaccccaagggtccatgacaacgcagcctggcatg
tcccccatgggaattcccccaagaatggggacacctacatcttatggtggtcaaccccca
agaccacaaggtcctcctcagcctggatatggtccacaaggaatgggggtccctagaagt
actgctcctccaatgggtgggcagagacccatgggaacaccaaggcctcctacaggaaca
cagccaaatttttacagccctcactcaatgggtggtccaccaacaacatcaggtgtgtac
acgagcatgtcctcaccttctttcagtggacagcaaggtatgccttcatcatccatgcaa
ggaatgtttcctccaacttcttatggaggtcagcaatcaccggctggaggtcctccgtta
ccaggagttggagcaggtccccccataggacctacaggggcaccacccatgagacctgca
atgccctctgtaccatccagtacagcacccccaggtatgcctcccatgtcaagacccgga
ccagtccctccaggaccgactgggtatcctcagcccccagggatgtatcctgtagcatca
ggagcacccccaacatcatttggcacaacccagccacctccagctgggtaccctactcaa
acacaacctggccggattggacccacacccactcgaccaaaatacccacaaatgcctgca
acatccttttcaactgggcaatcacaaaacccaaatccttcacagtttcctccaccaggg
ggataccagccaaatgcacagcccccagggtcgaaccagatgggaggtggagggcaggga
ggaatgccttcgcaggccccaggaggcttccctatggccactcagcagccaggaggactg
agtgccagttttggttctatgtcgatgcaggacagagcagtgaacttgttgaatgagaaa
aatctcctgcctccagagggactggaagtggtaaaaccaagactaaacaatgagtttaaa
aaggtcaactgtcaaccagatgtattcagatgcacattaactgctatacctcagacctca
agtttattgaacaaagcaagactgcctttaggaatacttattcatccgttcaaagatttg
tcgaatgcagttgagcaacttccagtgattcagtccagtgtgatagtgcgctgtcgatcc
tgccggacctacatcaatccatttgttttcttcgtggattctcgcaggtggaagtgcaac
ctttgttacagggtgaatgaactgccggatgaatttgcttatgaccctgtgactaaaacc
tatggtgagcctcagagaagacctgaaattaagtcatctaccatagaattcatagcgcca
tcagactacatgctgcgaccgccccaaccagcagtctatttgttcctactcgatgtttct
tttaatgctgtagaaactgggtacctgaatattttctgtaatatgttgatggaggaactt
gacaagttgccaggcgactcgagaacccagatcggatttattgcatatgatagggcatta
catttctttaacctggctgaaggattgtcccaacctcagatgttaactgtgtctgacatt
gatgacattttcctgccatgtcctgataaccttctagtcaatttacaagagagcaaagaa
ctggttctggatctcctgggccagataccagttttgtttgaggataatctggaaacagga
agtgctttaggttcagcactgcaagctgcccacaaactggtgggtccagttggaggtcga
gttacaatcatgcagacagtgctacctaccgccggaccaggcgctctccagtcgagggag
gacgccagtttaagaatgggcaagaatgtgacaaaccttggtcctgcaacagacttttat
aagaaactagcattagagtgctcagcacaacaagtggctgttgatttatttatgctgaat
ggacagtacacagatattgcaaccatttcatgtgtgtccaagtactctggagggtctgtc
taccacttccctctattccatgctgcaaaaaatccggcattaacggaaaaatacgaggct
gacctgaggaggtacctcaccagaaagatcgggtttgaggcggtgatgaggatccgctgc
actaaagggttaagcatccacactttccatggtaacttctttgtgagatccacagatcta
ctgtctctgcccaatgtgaacccggatgctggatttggaatgcaaatgtctatagaagat
tctcttgtagacactaatactgtgtgtttccaagctgcactgctctacacatcaagtaaa
ggcgagcgtagaataagagttcacaccctttgtctaccagtcactaaccagttatcagat
atctacgctggagcagatcagcaggcaatcataggacttctggccaaaatgggggtggac
aggagtgtgacctcttcacttccggatgcccgggaagcaatgattaatgctgccatggat
tctctggcctcctttggaaacaccattcctccagctcagaggattggcagtctgcccatc
tgctttactctgagaatgctgcccacatttatactggctcttttgaaaagtaaagctttc
cgtgttggcatgaacacgcccttggatgaccgtgtgtttgccatgcagcagtgcaagagt
ttgcctgttggacagctcatcaagaccttatatcccgacctctacccaatccatggcatc
caaagctttgatacagaaaagaagggggatatagttgtgcccaagcctcctcgactacac
ctgtcgtctgctaacattgaccgtacaggtgtgtatcttctggatgctctggacagtata
tacctgtatgttggtagtgcggctcctcaagacttcatacaggaagttcttgatgcacct
aacttcacatccatccctgatggcatgattgatttaccagaattggagaacgagaagtca
gaactagtgaggaattttataacagacttgttggataatcgaccgggtggagcatgtttt
tatgtgatcagagatgacagcaagagaagattacagttcttcgaacacatggttgaagac
agatcagaatcctccatgtcactttatgaattcttgcagcacctacaaaaacagatcaag
agttga
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