Crassostrea virginica (eastern oyster): 111118858
Help
Entry
111118858 CDS
T09197
Name
(RefSeq) LOW QUALITY PROTEIN: leucine-rich repeat protein lrrA-like
KO
K19613
leucine-rich repeat protein SHOC2
Organism
cvn
Crassostrea virginica (eastern oyster)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_1
LRR_LRWD1
LRR_5
LRR_13
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
111118858
NCBI-ProteinID:
XP_022314250
UniProt:
A0A8B8CEY4
LinkDB
All DBs
Position
2:3114498..3120563
Genome browser
AA seq
716 aa
AA seq
DB search
METTHDDYREQIDGGMLDLSSQDLCYVPHQIVNGIGPEITKLVLDFNDIKELPASFGEVC
VNLQILXLVGNLLAELPSSIGNLSQLRELHLNDNGLKTLPDSICHLCSLEILKLTGNSIQ
ALPDDLGEISSLKTFCCDENKLVNLPLTLGLLTELVVVELSDNFLTVIREGIGQLKSLRI
FNVSNNKLEKIHDSFGDLENLDIVDLSGNHMENLWDHFNSAKCVQKFYADRNRLVEIPPW
FADMXDAVEISLSDNQFTKCAVSEKMGPTCKKLTLLDLGGNFMEKLPDSFGKMNNLQTLK
LGSCIGELERRAFQNGNWLTYLPESFCDFTKLKVLYLDENLVQELPEQFGNLVNLEFLDM
GKKSLYECLRELPDSFCQLKSLKICQLSKNEIQILPTNFGDLCALEDLRLDNNLLEELPL
SFNKLTSLKSLDLFNNKLTEIPEALNYFTQLVRLDLSRGRSNRFNIPWYEVPQINKSANY
PPRNPELKNNWRGRTRQDLTMXGDQIIKMDVTTEELDFEPPPKDLGFSENLLRDAAEHGM
SFWKAHGEKGRRQKFVRKNDFSFLNVQRRRFLQEDDEEEEEDPDEDDEEECEQEEEEKNE
DDDFEPPIFQAKVNASGPVMNTMDAGYKDITEVTDGENWDDEVEDLENPYDVQYDDNYFN
NIYQHPRPXDMAEAGYVVDDHLCLPYDIHVQPVSKDRVDHQVETGQFDDDSEDDGT
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggaaactacacatgatgattaccgagaacaaattgatggagggatgctggatttatct
tcacaagatctctgctacgtcccccatcagattgtgaatggtattggaccagaaatcacc
aaattagttctggattttaatgatattaaagaactcccagcttcttttggagaagtttgt
gtcaatctccagattcttntccttgttgggaatcttttagcagaattaccatcaagtata
ggaaatttgtctcagttgagagagttacacttgaatgataatggattgaagactctacca
gactcaatttgtcatttatgtagcttggaaattttgaaattaacaggtaacagcattcaa
gctctacctgatgatcttggtgaaataagtagcctaaagacgttctgttgtgatgaaaat
aagttagtgaatctacctcttactttaggtttattaacagaacttgtagtcgtggaactg
agtgataatttccttacagttatcagagagggcataggtcagttaaaatcattacggata
ttcaatgtgtcaaataataaactggaaaagattcatgatagttttggagatcttgaaaac
ttggatattgtggatctttctggaaatcatatggaaaatttgtgggatcactttaattct
gccaagtgtgttcagaaattttatgctgatcgaaatagactggttgagattcctccgtgg
tttgctgacatgngagatgcagtggaaatctcgctgagtgacaatcagtttacaaaatgt
gccgtgagtgagaaaatgggaccaacatgcaagaaactcacccttttagacctaggtgga
aatttcatggaaaagcttcctgattcctttggaaagatgaataatttacagaccctaaaa
ctgggaagttgtattggtgaactggagagaagagcatttcaaaatgggaactggttgaca
taccttcctgagagtttctgtgatttcactaaattgaaagtcttgtatttggatgaaaac
ttggttcaggaattacctgaacagtttggaaacctagtcaatttggaatttcttgacatg
ggtaagaaaagtctgtatgaatgtttgcgcgaactacctgattcgttctgtcaactgaag
tccttaaagatatgccagttatccaaaaatgagattcagattttaccaacaaattttggt
gacctttgtgctctggaggatctaagattggataataacttgcttgaggaactgccactt
tctttcaacaaattgacaagtttaaagtcactagatttattcaacaataaactgacagaa
attccagaggctttgaattattttacacaattagttcgattggacttgtcgaggggcaga
agtaatcgatttaacattccatggtatgaagttcctcaaataaataaatcggcaaactac
cctccacgaaaccctgagcttaaaaataattggcggggtcgcactcgacaagacttaacc
atgntaggagaccaaatcatcaagatggatgtcactacagaggaattggactttgagccc
ccacccaaggatttgggattcagtgagaacctcctaagggatgcagcagaacatggaatg
tcattctggaaagctcatggagaaaagggaagaagacagaaatttgttcggaagaatgac
ttcagcttcctgaatgtccaacgtcgaagattcttacaggaagatgatgaagaggaggag
gaagatcctgatgaagatgatgaagaggaatgtgaacaggaagaagaggagaagaatgag
gatgatgattttgagcctccaatttttcaggccaaagtcaatgcctctgggcctgttatg
aacaccatggatgctggatacaaagacattacagaagtgacagacggtgaaaactgggac
gatgaggttgaagatttagagaacccttatgatgtgcagtatgatgacaactactttaat
aacatttaccagcacccccgccccnnggacatggcagaggctggctatgtggtggatgac
cacttgtgtcttccatacgacatccatgtccagccggtgtctaaagacagagtggaccac
caggtggaaactggacagtttgacgacgattcagaggatgacggcacctga
DBGET
integrated database retrieval system
