Crassostrea virginica (eastern oyster): 111118905
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Entry
111118905 CDS
T09197
Name
(RefSeq) mismatch repair endonuclease PMS2-like
KO
K10858
DNA mismatch repair protein PMS2
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03430
Mismatch repair
cvn03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
111118905
03460 Fanconi anemia pathway
111118905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvn03400
]
111118905
DNA repair and recombination proteins [BR:
cvn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
111118905
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
111118905
NCBI-ProteinID:
XP_022314314
UniProt:
A0A8B8CGL3
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Position
2:48523281..48539654
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AA seq
933 aa
AA seq
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MEEDHVLLAKEIKAIDKKSVHRICSGQVVLTLATAVKELVENSIDAGATSVEIKLKDYGL
ESIEVGDDGVGVEESNFEGLTLKHHTSKLQDFTDLINVDTFGFRGEALSSLCALSSLTVT
TKHKDASVGTKLEFDFNGKINTRSPHPRQRGTTVLLQNLFSTLPVRHKEFQRNIKKEFSR
MIQVLTSYCIISTGVRITCSNQTKKGGRSTVVSSSGNKTLRENITDVFGPKQIQSLMEFK
KFDPSDDVLDEFNLKVTEDAADCFRIEGYVSKCDHGLGRSTTDRQFIFINGRPCDSVKIS
KVINEIYHQYNRHQYPFVALHITMKKESVDVNVTPDKRQIFMENEKILLATIKTSLTKIY
EPTVSSYPVALFTDKMFQSNLSSTNSASETKAETARTASQNLAGKLQISALSNLKRKFSS
AFAKPESEGAVSPSRKDRSPASKQRRLDRFLHKSSPKKDKDDDGQQKSEEDVVFMIKEEG
IPFPTGEQCVTDSITEKVGPDGDCARSDVKVIFHSPSDHSQRIETSIRDPRDLTAVDLDT
QSVEKDYSGSGNRVPVCSIDSRSSISSSSEISDHESSSKKNSSNNNSLNHVCSKQNTQDT
VKCSGSDQLCSNLISGNSSVQEWNSKVCSVDNSDVIVTKPVCLDRLDDQDSAGPNTSECS
EQTTEDSPEESMPLTITSLDEKESHFKKERTVHFDFKKLKEQFETAPKKKTSSENISRKF
RAVISPNENQSAEEELSREISKSMFKEMEILGQFNLGFIIVRLNRDLFIVDQHATDEKYN
FEQLQQNTVIQCQKLIQPQNLELTASNEIILMDNLEVFRKNGFDFIVNEHALPMQRVKLT
SIPVSRNWTFGKEDIEELIFMLSDSPNVMCRPSRVRQMFASRACRKSIMIGTALKKSEMK
KLVCHMGEIEQPWNCPHGRPTMRHLINLDMVPK
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagatcatgtattactggccaaagaaatcaaagctatcgacaagaaatcggta
cacagaatctgttctggacaagttgttcttactcttgcaacagcagtgaaagaattggta
gagaacagcattgatgcaggggctacctcggttgaaatcaaactgaaggactatgggctg
gagtccattgaagtcggggatgatggtgtgggagtggaggagagcaactttgaaggacta
actttaaaacaccatacctcaaagctacaggattttaccgacttgattaatgtggacaca
tttggtttccgtggggaagcattgagctccctttgtgccctaagctcacttactgtaacc
acaaagcacaaagatgctagtgttggcacaaagttggagtttgatttcaatggaaaaata
aacacaagatctcctcatccaagacagagggggactacagtgctgctacaaaacctattc
tccaccttgcctgtccgtcacaaggagttccagaggaacatcaaaaaggagtttagtcga
atgattcaagtcctgacttcctactgcatcattagtacaggggtccgcatcacatgctca
aaccagaccaagaaaggcggacgatcaacagtggtgtctagcagtgggaacaaaacccta
agagaaaatatcacagatgtttttggacccaagcagatacagagtctaatggagttcaag
aagtttgaccctagtgatgatgtccttgatgagtttaatttgaaggtcactgaggatgct
gctgattgttttagaattgaaggttatgtttctaagtgtgaccacgggctggggagaagc
accacagacagacagtttattttcatcaatggacgaccttgtgattcagtaaaaatttcc
aaggtgatcaatgaaatataccaccagtacaatcgacaccagtatccttttgttgctctc
catattaccatgaagaaagagtctgtggatgtcaatgtcactccagacaaacgtcagata
tttatggagaatgagaaaatcctgctggcaacaatcaaaacttccttgacaaagatctat
gaaccaaccgtgtcatcctatccggtcgccctgtttacagacaaaatgttccaaagcaac
ctatcctccacaaatagcgcatcagagacaaaagcagaaactgcacggacagccagtcag
aacctagctggaaaattacagatatcagcgttgagtaatttaaagagaaagttttctagt
gcctttgccaaaccagagtctgaaggagcagtgtctccctctcgcaaggatagaagtcct
gcctcaaaacagaggagactagatagatttcttcacaagtcttcacccaagaaagataag
gatgatgatggtcagcagaaatcagaagaagatgttgtttttatgataaaagaagagggc
attccatttcctacaggtgaacagtgtgtcacagacagtatcacagagaaagtgggtcct
gatggggattgtgcaaggtcagatgtcaaggtcattttccacagtcccagcgaccattca
cagagaatagagacctctatcagagaccctcgtgacttgaccgcagtagatcttgacacc
cagtctgttgaaaaagactattcaggatctggaaatcgggttcctgtttgttcaatcgat
agcagatcctcgatatccagttcaagtgagatatctgatcatgaatcatcttccaaaaaa
aattcgtctaacaataattcccttaaccatgtgtgttcaaaacaaaatacccaagatacc
gtgaagtgttcaggtagtgaccagttgtgttcaaaccttatttctggaaattcttccgtg
caagaatggaattccaaagtgtgttctgttgacaattctgatgtgattgtcacaaagcct
gtctgtttggatagacttgatgaccaagattccgcaggtcctaacaccagtgaatgttct
gaacagacaacagaagactcccctgaagaaagcatgcccttgactatcacaagtttggat
gaaaaagaatctcatttcaaaaaggaaagaactgtacattttgatttcaaaaagttgaaa
gagcaatttgaaacagcaccaaagaagaagacaagcagtgagaatatcagcagaaagttc
cgtgcagttatctcccccaatgaaaatcagtctgccgaagaggaactgagccgagaaatc
tcaaagagcatgttcaaagagatggagatacttggacagttcaacctgggcttcatcatt
gtgagattaaacagagacttgttcattgtggaccagcatgcaacagatgagaagtacaac
tttgagcaactccagcagaacactgttattcagtgccaaaagctgatacaaccacagaac
ttggagcttacagcaagcaatgaaatcattctgatggataacctggaggtcttcagaaaa
aacggattcgattttatcgttaacgaacatgcactacctatgcagagagtgaagctgacc
tcaatcccagtcagtaggaactggacatttggaaaagaagacattgaggagctgattttt
atgttgtctgattccccaaatgtgatgtgtcgcccctctcgtgttcgtcaaatgtttgcc
tccagagcatgcagaaaatcaatcatgataggtactgcactcaagaaatcagaaatgaaa
aagcttgtgtgccacatgggagaaatagaacaaccttggaattgcccacatggcagacca
actatgaggcacctcatcaacttggatatggtcccaaaataa
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