Crassostrea virginica (eastern oyster): 111118909
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Entry
111118909 CDS
T09197
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase SMURF2-like
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04120
Ubiquitin mediated proteolysis
cvn04137
Mitophagy - animal
cvn04144
Endocytosis
cvn04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111118909
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
111118909
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111118909
04137 Mitophagy - animal
111118909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvn04131
]
111118909
04121 Ubiquitin system [BR:
cvn04121
]
111118909
03029 Mitochondrial biogenesis [BR:
cvn03029
]
111118909
Enzymes [BR:
cvn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
111118909
Membrane trafficking [BR:
cvn04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
111118909
Autophagy
Mitophagy
Other mitophagy associated proteins
111118909
Ubiquitin system [BR:
cvn04121
]
Ubiquitin ligases (E3)
HECT type E3
111118909
Mitochondrial biogenesis [BR:
cvn03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
111118909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
111118909
NCBI-ProteinID:
XP_022314325
UniProt:
A0A8B8CF55
LinkDB
All DBs
Position
2:complement(5226940..5241494)
Genome browser
AA seq
772 aa
AA seq
DB search
MASNEPRRHVQKIRLTVLCAKNLAKKDFFRLPDPFSKISVDGSGQCHSTDTCKNTLDPKW
NQHYDLYVGPKDSITISXWNHKKIHKKQGAGFLGCVQIKSNAIQQLKDTVVIQRLDLQRN
TADDSDNVRGQIVISLISRDRGGSGSGPVNTDAPALIPQDPNELPEGWEERRTASGRVHY
VNHITRTTQWEKPTRPATESVRGSNSSNSLQSANSSSSRANNRVVPNINNNNNNNNNEDN
DCSSNPPLPRRRSTRHRNYLNRSHLHNAIELPDGYEQRTTQQGQVYFLHTRTGVSTWHDP
RVPRDLSGSEIQDEELGNLPTGWEVRHTGSGRVYFVDHNNRTTQFTDPRLSLSASVQRLQ
TPRTIEESAPAPIRRIIDKENDSPVPKYKRDLVQKLKXLKLELQNLQPQGGHCRMEVSRE
EIFEDSYRTVMKLRAKDLRKRLMVKFKGEEGLDYGGVAREWLYLLSHEMLNPYYGLFQYA
RDDIYTLQINADSGVNPVRTLSYFHFVGRIIGIAIFHGHYLDGGFTLPFYKQLLAKPVTL
NDLENVDPELHRSLVWLLENNIEAVLDHTFSVEHNSFGKXQEYELKPGGRHIKVTEENKS
EYVKLYVQWRFMRGIEAQFLALQKGFNEIIPQHLLKPFDERELELMIGGLGKIDLDDWKK
HTRLKHCTAESNIVKWFWRSVDEFDDEMRARLLQFVTGSSRVPLQGFKALQGSTGNAGPR
LFTIHQVDANTDNLPKAHTCFNRIDIPQYENYEKLYSKLSCAVEETCGFAVE
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atggctagtaacgagcctagacgacatgtccaaaagatcagactaacagtgttatgtgcc
aaaaatttggccaagaaggactttttccgtcttcctgatccattttcgaagatcagcgtt
gatggatcgggacaatgccattcaacagacacatgtaaaaacacattagatccaaaatgg
aaccaacattatgacttgtatgttggtcctaaagactccatcacaatcagtngttggaat
cacaagaaaatccacaagaagcagggggcgggcttcctggggtgtgtccagatcaagtcc
aatgccattcagcagctcaaggacacggttgtaatccagcgcctggacctccagagaaac
actgctgatgacagcgacaatgtccggggtcagatcgtcatcagtcttatttcgagggat
cgagggggctcgggatcaggacctgtcaatacagatgccccggctttgatcccacaagat
cccaatgaactgccagaagggtgggaggagcggcggacggccagtggtagagttcactat
gtaaaccatatcaccagaaccacacaatgggagaagcctacaaggcctgctactgagtct
gtcagggggagtaactccagtaacagcctgcagagtgctaattcctccagcagtcgcgcc
aataaccgtgttgttcccaacattaacaacaataacaacaacaacaacaacgaggacaat
gactgctccagtaatcccccgttaccacggcgacggtccaccagacatcgcaattacctc
aacaggtcccacctacacaatgccatagagctacccgatggttacgagcaaagaactacc
cagcagggacaggtttactttttacacactaggacaggtgtcagtacatggcatgatccc
cgagtcccaagggatctgtccggatcagaaatccaggatgaggagctgggcaatctccct
acgggctgggaggttcgccacaccggcagtgggagggtgtactttgtagaccacaacaat
aggaccactcagttcacagacccccggctctcactgtcggccagcgtacaacgactgcag
accccacgaacgatagaggaaagcgcaccagccccaatcagaagaatcattgacaaggag
aatgattcgccagtcccaaaatataaacgagatctggtgcagaagctgaagnatctgaag
ctagagttacagaacctgcagcctcagggcggccactgtaggatggaggtgtcccgagag
gagatattcgaggactcctacagaacagtcatgaagttgcgtgccaaagacctcagaaag
aggctgatggtgaaattcaaaggagaggaggggctggattatgggggtgtcgccagggag
tggttgtacctgctgtcccatgagatgctgaacccttactatggcctattccagtatgcc
agggatgatatttatactctacagatcaatgcagactcaggagtcaatcctgtaagaaca
ctgtcctacttccatttcgtgggccgaatcattggtatagcaatattccacggtcattac
ttggatgggggcttcacgttaccattctacaaacagctacttgccaaacctgtgactctg
aacgacctagagaatgtggatccagaactgcacagaagcttagtctggttactagagaac
aatatagaagctgtgctggatcatacattttctgtggaacacaactctttcggaaagntc
caggagtacgaactgaagccaggcggcagacacatcaaagtcacagaggaaaacaaatca
gaatatgtcaaattgtatgtgcagtggagatttatgaggggaattgaagctcaattttta
gccttacagaaaggtttcaatgaaatcattcctcaacatttactgaaaccttttgatgaa
agggaacttgagttaatgattggtggactaggaaagatcgatttggacgactggaaaaaa
cacaccagattaaaacattgcacggcggagagtaacattgtgaagtggttctggcggtct
gttgacgagtttgatgacgagatgagggcccgcctactccagtttgttacaggaagttct
cgtgttccattacaaggcttcaaggctttgcagggttctacaggaaatgcaggcccaaga
ctgttcacaattcaccaggtggatgctaatactgacaatcttccaaaggcacacacgtgt
tttaatagaattgacatacctcagtatgaaaactatgaaaagctgtattccaagttatca
tgtgcagtagaagagacatgtggatttgctgtggagtga
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