KEGG   Crassostrea virginica (eastern oyster): 111118912
Entry
111118912         CDS       T09197                                 
Name
(RefSeq) LOW QUALITY PROTEIN: protein bicaudal C homolog 1-B-like
  KO
K18756  protein bicaudal C
Organism
cvn  Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:cvn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cvn03019]
    111118912
Messenger RNA biogenesis [BR:cvn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     111118912
SSDB
Motif
Pfam: KH_BICC1 KH_BICC1_1st KH_1 SAM_1 SAM_2 KH_Vigilin KH-I_KHDC4-BBP
Other DBs
NCBI-GeneID: 111118912
NCBI-ProteinID: XP_022314332
UniProt: A0A8B8CEW9
LinkDB
Position
2:20594584..20613318
AA seq 881 aa
MADKQSVPSNSYSSMLGSNEHGVAQPCKDELEPGYIEERFRVDRKKLEQMLQGSSENDEN
AEEFFKRVMSESKTQITWPSKLKIGAKSKKDPHIKIIGLPDDVKIAKEEILTILDTKINR
VTLKMDVSYTDHSHVIGKGGNNIKKXMQQTGCHIHFPDSNRGNSIQEKSNQVSIAGEPVG
VEIARAQIRELLPIVYMFELPMTGTLRPLPDVSSAEIQKLQQQYNITISFRQRPRMYVST
VIVRGSVYNADAVKDGIAKLMELLTGNSTVKFAVSMQLEIAPQHHLFIIGRSGINIKQIM
ERTGASIHFPDPHTSAPQRKGTIYITGNIESVFQARQHLIGCLPLVLMFDVKNDIEIEPG
HIARLMEQLDVFISVKPKPKQPNKSVIVKSIERNAANMYMARLHLLGLKKDDKNFPANCD
KKLIESKFLACDEGGSLAKLDLEIAIQENNLSSSLGGESPKIFGRSHSAVDLSSLQQNLG
PLQHGIPSLGDSNGTTDLIDRGGPIYSKGLMSGSHSLESSLNRSTQFPQPTDPMKNMEEN
NSTNNEVALQHLQNEIQKLQNLQEMQKLGELNIENLSAMDMGNLHQNLLQLRVANEAGLI
GNSYSLVEDYEQRKLMATKAMQKKPDGETRNPTDIWSGMGFSKSMPESVIRERMQRIQGV
LAYCEPTMETTYENPNESEELDLDPWNDPNAGAFGSKPVNLAPGEFPSPRKKCDYNDYLS
SSNHVDSATLPQATSLWDNDHADLPELFSKLGLGKYSDXFRQQEIDLATFLTLTETDLRE
LGITTFGARRKMLLAIADLNKRRNLLKIESGVDSVPVASEFSDNGTTTSLRMESQTSTPS
QGLGHLSSSLGRSAFSHPRSLMSSYSSPLNHGGKFPSRGSF
NT seq 2646 nt   +upstreamnt  +downstreamnt
atggcggataaacaatcagtaccgtccaacagttacagtagtatgctaggatctaacgaa
catggtgttgcacaaccttgcaaggatgagctggaaccaggttacattgaggaaagattt
cgtgtggatcgcaaaaagctggaacaaatgcttcaagggtccagtgaaaatgatgagaat
gcagaggagtttttcaagagggtcatgagtgaaagcaagactcaaataacatggccctca
aaattaaaaattggtgcaaagtcaaagaaagatcctcacatcaaaataattggactgcca
gatgatgtgaaaatagctaaagaagaaattttgaccatactggatacaaagatcaacaga
gtgacactgaagatggacgtgtcttatacggatcactcacatgttattggcaagggaggc
aacaatatcaaaaagnttatgcaacaaacaggatgccatattcattttcctgactcaaac
aggggcaacagtattcaagaaaaaagtaaccaggtctctatagctggtgaaccagttggg
gtggagatagccagagctcaaatcagggaattacttcccatagtttacatgtttgagtta
ccaatgactggaacacttcgcccattacctgatgttagctctgccgaaattcaaaaacta
cagcaacaatataacattaccatcagttttcgccagaggccacgtatgtatgtgtcgact
gtgattgtgcgggggtcggtttacaatgcagatgctgtgaaggatggtattgcaaaatta
atggaacttctcacaggaaattcaacagtcaaatttgctgtgagtatgcagttagagata
gcacctcaacaccatctcttcatcattggaaggagtggtataaatataaaacagattatg
gaaaggacaggtgctagcatccatttccctgatccccatacatcggctcctcaaaggaag
ggaaccatttacattactgggaacattgagagcgtatttcaagccaggcaacatctcatt
ggatgcctgcctctggttcttatgtttgatgtcaaaaatgatattgaaatagaaccagga
cacatagctcgtctgatggaacagcttgatgttttcataagtgtcaaaccaaaaccgaag
caaccaaacaagtctgtgatagtgaaaagtattgagcgaaatgctgccaatatgtacatg
gcacgcttacacttactgggattgaagaaagatgacaaaaatttcccagccaactgtgat
aagaagttaatagaatctaaatttttagcctgtgatgaaggagggtccttggccaagtta
gatcttgagattgccattcaggagaataacctcagtagcagtcttggaggagaaagtccc
aaaatatttggacggagtcattctgcagtggatttgtcctcccttcagcagaatctagga
cctctacagcatggaattcctagtctaggggactctaatggcaccacagatctcattgat
agaggcgggcccatctactctaaaggtctgatgagtggcagccattctctggagagcagc
ctaaataggagtactcagtttccacaaccaacagatcctatgaaaaatatggaggaaaac
aacagcacaaataatgaagtggcattgcagcatcttcagaatgaaatacaaaaattgcaa
aatttacaagaaatgcagaaactcggagaattgaatatcgagaacctcagtgcaatggac
atgggcaatttacatcaaaacttgttacaactaagagttgccaatgaagctgggcttata
ggcaactcctacagtttagtggaagattatgagcaaaggaaactaatggcaacaaaagct
atgcaaaagaaaccagatggcgagacaagaaatccaacagatatttggtccggaatgggc
ttttctaaatccatgcctgaatctgtcattcgcgagcgaatgcaaagaattcaaggtgtc
cttgcatattgtgaaccaacaatggaaacaacctatgagaatccaaatgaatctgaagag
ctagatcttgatccttggaacgatccaaatgcaggagcattcggtagcaaaccagtgaac
ctggcccctggggagtttccaagccctcggaaaaaatgtgactacaatgactatctaagc
agtagtaaccatgtggacagtgccacccttccgcaggccaccagtttatgggacaacgac
catgctgacctcccagagcttttcagcaaactcggcttagggaaatatagtgatntgttc
cggcagcaggagattgatttggctacctttttgacactaactgagacagatttgagagaa
cttggaataacaacatttggtgcaagaaggaaaatgttgctggccatagcagatttgaat
aaaagaagaaatcttttgaaaatagagagtggtgtagacagtgtgcctgttgcttctgaa
ttttcggacaatggaaccactacaagcctgaggatggaatctcaaacctccacaccctca
caagggctcgggcatttgtcctccagtttaggaagaagtgcatttagtcatccaaggtct
ctgatgagtagctattcctcacccttgaatcatggaggaaaattcccttcaaggggcagt
ttttaa

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