Crassostrea virginica (eastern oyster): 111118953
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Entry
111118953 CDS
T09197
Name
(RefSeq) acetylcholine receptor subunit alpha-1-B-like
KO
K04812
nicotinic acetylcholine receptor beta-1
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
111118953
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cvn04040
]
111118953
Ion channels [BR:
cvn04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
111118953
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF8051
Motif
Other DBs
NCBI-GeneID:
111118953
NCBI-ProteinID:
XP_022314393
UniProt:
A0A8B8CF28
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Position
2:6814689..6816062
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AA seq
457 aa
AA seq
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MPSLVKVLMVILCAETTVSAYFNDDLYLQEAAELQDFLMNERDGKSSYRKTLPPSVKVNI
GLYFELLSLNDFDEIRGRFECNGMLRLNWSDQRFSWDPMKFNNTMLTPFMSSQVWKPQIS
LLNTFSKFIIINDKREEFVIWYTHEGLANLLIAGVFDVTCDPNVKYFPFDSHECVLLFIP
FENLLFPEYASPFTIDIMEDSIIKDNFADRDDDGKWIYRTLTPCIVKLPSRQLTAVAFPV
NIHRRPTFAIVNIILPVMLLGFLNLAVFFQPVQAGERISFSITVLLSFTVYMIYIGEIIP
ETSNPMPVLSFVLIFKLGCSTCIVIAVAIVTRIFHRERRKLSPLLRKMIAAFLKMGSCFS
CKKHSDELTGEKQADDLSSIVESRGDNRDNQVGDAGHLKNESTDDWTKMCIVLDKLFFLF
FLTLLLLESAFYILAYVVMSGDRENRQTQSQICTDGL
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgccttcccttgtgaaagtgttgatggtcattctatgtgcggagacgacagtgtcagca
tatttcaacgacgacctgtacttacaagaggctgccgagttgcaggactttctgatgaac
gagagggatgggaaatccagctacaggaaaaccttacccccctccgtaaaggtcaatatt
ggactgtattttgaacttttaagtctgaacgattttgatgagatacggggtcgttttgaa
tgtaacgggatgttgcgattgaattggtcagaccaacggttttcttgggatccaatgaag
ttcaacaatacaatgctgacgcctttcatgtcctcacaggtttggaagccgcagatatca
ttgctgaacaccttctccaagttcatcattatcaacgataaaagagaggaattcgtcatt
tggtacacacatgaaggactagctaatttgttgatcgctggtgtctttgacgtcacgtgt
gatcctaatgtgaagtactttccttttgattcccacgagtgtgttctactttttataccg
ttcgaaaacttgctttttccggaatatgcttcgccgtttacaatagacataatggaagat
tctatcataaaagacaactttgctgatcgagatgacgacgggaagtggatatacaggaca
cttaccccgtgtatcgttaaactgcccagtcgacagttaacggctgtggcatttccggtc
aatattcatagacgaccgacttttgccattgttaatatcatacttccggtgatgctgctt
ggatttctcaacttggctgttttctttcagccagtgcaagctggcgaaagaatatcattt
tctataactgtgttgttatctttcacggtgtatatgatttatatcggggaaattattcct
gaaacatccaatcctatgccagtgctgagctttgtcctgatctttaaactgggatgtagt
acgtgcatagtgatagcggttgccatagtcacgcgtatatttcatcgagaaagaaggaaa
ttatcgccattgttacgtaagatgatagcggcgtttttaaagatgggatcttgtttttct
tgcaaaaaacactctgatgaattgacaggtgaaaagcaagcagacgacttatcgagtata
gtagaatcacgtggcgataatcgtgataatcaagttggtgatgcgggtcatttaaagaac
gaatcgacggacgactggaccaaaatgtgtatagttttagacaagcttttcttcttattc
ttcttgacattgctactgttggagtctgctttctatatcctggcctacgtagtgatgtct
ggagacagggaaaataggcagacacagtcccagatttgtacagacggcttatag
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