Crassostrea virginica (eastern oyster): 111119018
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Entry
111119018 CDS
T09197
Name
(RefSeq) intron-binding protein aquarius-like isoform X1
KO
K12874
intron-binding protein aquarius
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111119018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvn03041
]
111119018
Spliceosome [BR:
cvn03041
]
Complex B
Other components
Prp19-related factors
111119018
Complex C
111119018
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aquarius_N_1st
Aquarius_N_2nd
AAA_11
AAA_12
Aquarius_N_3rd
AAA_19
ResIII
UvrD-helicase
AAA_30
DEAD
AAA_16
AAA
RecA_N
SLFN-g3_helicase
AAA_22
UvrD_C_2
PhoH
DnaB_C
NB-ARC
nSTAND3
Motif
Other DBs
NCBI-GeneID:
111119018
NCBI-ProteinID:
XP_022314514
UniProt:
A0A8B8CH57
LinkDB
All DBs
Position
2
Genome browser
AA seq
1449 aa
AA seq
DB search
MSTPAETDKTKWRNKALTVEQIQEDNITQLASQHWSKKALEHGVPFKTEIVEKVFQEELV
ASKFSTKRTMLLEFSQYLENYLWPNFTKERGHAHIMSIILMVNEKFRERVPPWESFKQHP
ENFSDFILRSLETCLEERTSLRELSILLIFLIHCFNSLEVDLIREQIQKLVSLPIWSNIL
PGKRDEIFKNNPKYKKFFNLIKKNDAKLSEEQMKRVTFERSFLCDMIKKFLGVLDTIPLK
GEVPHSKINFCERFLELMIDIEAQLPTRRFFNVLLEDCHLVVKCQLSNLCKRSEGKLFGQ
LLEMLTSYTEFEIDDITGEALTLHNRIDIHYDRVLQLQKVAFKHFPDLQRFAIANVASVD
TRAALTKYFKSLSNVELHKLLAYIHQLPPVEKEEECIPDADYLLELLISRHEKRKSQQER
VNEMPLYPTEKIIWDENIVPVEYFSGEGCLALPKLNLQFLTLHDYLLKNFDLFRLESTYE
IRQDIEDAGSHLKPWRSEDGSCLFGGWARMAQPIVGFNVVEVAKPRVGESHPAQVRADVT
INLSVRPQIKKEWEDLRKHDVAFLITLRPTVPIQHKYNFREPFIPQVGLTYVRGCEVEGM
LDNEGKVIEDGPEPKPQLWGDTRTFRVWLDPNQYQQDMTNTVDGDEDVYETFNVIMRRKP
KENNFKAVLETIRDLMNTECVVPDWLHDLILGYGQPDAAHYSKMSNTIETLNWNDTFLNI
DHLKASFPGHEFEITSDDVSKCVPPFRLTFPKQQEPTTGKRKAEEEEPKAAKKIIVQPHV
IENRGPYPYNQPKKNQIPFTPTQIEAVRSGMQPGLTMVVGPPGTGKTDVAVQIISNLYHN
FPEQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEALETEKDFSRYGRVNYVLA
QRLELLEEVARLQSSLDVQGDMSYTCETAGYFYLYQVLARWEEYQSKLRNQKEKTADIIK
DEFPFTKYFENAPQPIFKGRSYAEDLDMAEGCFRHIKKIFTQLEEFRAFELLRSGSDRAE
YLLIKEAKIIAMTCTHAALKRRDLVSVGFKFDNILMEESAQILEIETFIPLLLQNPEDNN
NRLKRWIMIGDHHQLPPVIKNMAFQKFCNMEQSLFTRLVRLGVPTVDLDAQGRARPGIAS
LYNWRYKKLGSLSHVMVNAEYKKANAGFVFDYQLIDVQDFNGVGESEPNPFFYQNLGEAE
YVVATFMYMRLLGYPAEKISILTTYNGQKHLIRDVIKQRCGRNQFIGTPHKVTTVDRYQG
QQNDFILLSLVRTKTVGHLRDVRRLVVAMSRARLGLYVFGRVSLFSNCFELTPTFNKLMA
RPLQLHITPSEVYPPTRKMNDQIKGEAMVMKNMPHMAQFVYDFYNQKINRLMSQPEGGRQ
TQAEPLEKPPASKQSPASKQMPTIKPQEEKPQEGEPQKEKPQEAEPQKEKLQEAEPQDPE
PMEESNAAD
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atgagtacaccggctgaaactgataagaccaagtggcgaaacaaagccctgactgtagaa
caaatacaagaggacaatattacacagcttgccagtcaacattggtctaaaaaggctttg
gaacatggtgtaccattcaagactgagattgttgagaaggtcttccaagaagagttggtt
gcctccaagttttccacgaaaagaaccatgctattggagttcagccagtatcttgaaaat
tatttatggccaaattttaccaaagagaggggtcatgcacacattatgtctattatactg
atggtgaatgaaaagtttcgtgaaagagttcctccatgggaatccttcaaacaacaccca
gagaatttcagcgattttattttgaggtccctggagacttgtttagaagaaaggacgtcc
ctcagggaactatccattttacttattttcctcattcactgcttcaacagcttggaggtg
gatctaatacgagagcaaattcagaaattggtgtctctaccaatttggagcaacatcttg
ccgggaaagagggatgaaatttttaaaaataatccaaagtacaagaaattcttcaacttg
atcaagaagaatgatgccaagctttcagaggaacaaatgaaaagagtgacatttgagaga
agttttctctgtgacatgatcaaaaagtttcttggggtattagacactattccattgaaa
ggggaggttccacactccaagatcaatttctgcgagcgcttcctggagttgatgattgat
atagaggcccagcttcccactcgacgattcttcaacgtcctcctggaggactgccacctg
gtggtcaaatgtcagctgtccaatctctgtaaaaggtcagagggcaagctgtttggacag
ttgctggagatgctgaccagttacacagaatttgaaattgatgacatcactggtgaggct
cttacactgcataacagaattgacattcattacgacagagtgctacaacttcagaaagtg
gccttcaagcatttcccagaccttcaaagatttgctatagcaaatgtggctagtgtggac
actagagctgcgctcacgaagtatttcaaatctctaagtaacgtggaacttcacaaactc
ttggcgtatatccaccagcttcccccagtggagaaagaagaggaatgtatccccgatgcg
gactacctgctggaactcctgatctccagacacgagaagcgaaagtcccagcaagagagg
gtgaatgagatgcccctataccccacagagaaaatcatctgggacgaaaatattgttcct
gtggagtacttctctggagaaggttgtctggctttgcccaagcttaatctgcagtttctg
acacttcatgattatttgttgaaaaactttgatctcttcagactggaatctacttatgag
attagacaagatattgaagatgcaggatcacatctgaaaccatggagatcagaagatggc
agctgtttgtttggcggatgggctagaatggctcaacccattgttggattcaatgttgtg
gaggttgccaaacctcgagttggagaatcccaccctgcacaagtgagagcagacgtcaca
atcaacctcagtgtccgaccacaaatcaaaaaagaatgggaagacctgaggaaacatgat
gtggccttcctgatcacgctgagaccaacagtccctatccaacacaagtataacttccgg
gagccattcataccccaggtgggactgacctatgtacggggctgtgaagtggaggggatg
ttggataatgagggaaaggtcattgaagatggccctgaaccaaagccccagttgtgggga
gatactcgcactttccgggtctggctggatccaaaccagtaccaacaggatatgaccaac
actgtggatggtgatgaggatgtgtacgagacattcaatgtcatcatgaggaggaagcct
aaagaaaacaactttaaagctgtcctggagactatccgagacctgatgaacacagaatgt
gtggtgccagattggctgcatgatctcatactgggctatggtcaacccgatgcagctcat
tactccaaaatgagtaacacaattgagacattgaactggaatgatacattcctgaacatt
gatcatctgaaggccagcttcccaggtcacgagtttgaaatcacatcagacgatgtcagc
aaatgtgttcctcctttcaggttgacatttcccaagcagcaggagcccactacagggaag
agaaaagcagaggaggaggagccaaaggcagcaaagaaaatcatcgtacagccccatgtc
atcgagaacaggggaccctacccctacaatcagcccaaaaaaaatcagattcccttcacc
cccacccagattgaggcggtaaggtcgggcatgcagccggggctgaccatggtggtggga
cccccagggacaggaaagactgatgtggcggtccagatcatctccaacctgtaccacaac
ttcccagagcagcgaaccctcatcgtcactcactctaatcaggctttaaatcagctcttt
gaaaaaatcatggccctggacattgatgagcgacatttgcttcgtcttggtcatggagaa
gaagccctagaaacagagaaagattttagcaggtatggtcgggtgaactacgtccttgcc
cagcgcctggaactcttggaggaagtggcccggctacagagcagtctggacgtccagggg
gacatgtcttacacctgtgaaacagcagggtacttctacctgtaccaggtattggccaga
tgggaggaatatcaaagtaaacttcgaaaccaaaaggaaaaaactgcagacatcattaag
gatgagtttcccttcaccaagtattttgagaatgcgccccagcccatattcaaggggagg
tcttatgccgaggatctggacatggccgagggctgcttcagacacatcaagaaaatcttc
acccaactagaggaattccgagcttttgaattgttgaggagtggatctgatcgggcggag
tatctgttgatcaaggaagctaagatcattgccatgacttgtactcatgctgccctgaaa
aggagagatctggtgtcagtgggcttcaagtttgataacattttaatggaagagtcagca
cagattcttgaaattgagacttttattccattactgctacagaatcctgaagacaacaac
aatcgcctgaagaggtggatcatgattggtgaccaccaccagcttccgcccgtcattaag
aacatggcgtttcagaaattctgcaacatggagcagtctctgttcactcgacttgtccga
ctcggggttccaacagttgaccttgatgctcaaggtcgtgccagaccagggatagctagt
ctctacaactggaggtataagaaactcggtagcctgtctcacgtgatggtcaatgcggag
tacaagaaggccaatgcaggcttcgtgtttgactatcagctgatcgacgtccaggacttc
aatggagtgggagaatcggaacctaacccattcttctatcagaatctgggggaagccgag
tatgtggtagcaacgtttatgtacatgagactgttgggatatcctgccgagaagatctcc
attttgactacctataatggccagaaacacctgatcagggatgtgatcaaacagaggtgt
ggcagaaatcagttcattggaactccacataaggtgacaacggtagatcgctatcaaggg
caacaaaatgatttcatacttctatccctcgtcagaacaaaaactgttggacacttaaga
gatgtgaggagactggtggtggccatgtcccgcgccagactggggctctacgttttcggc
agagtctccctcttcagcaactgttttgaactcacaccaacatttaataagttaatggca
agacccctccagcttcatattaccccatcagaggtttatcccccaacaaggaagatgaac
gatcaaatcaaaggggaagctatggtgatgaaaaacatgccccacatggcccagtttgtg
tacgatttttacaaccagaaaatcaacaggttgatgtcccaacccgagggtggcagacag
acacaggctgaacctttagagaaaccaccagcaagtaaacaatcaccagcaagtaaacaa
atgccaacaattaaaccacaggaggagaaaccacaggagggggagccacagaaggaaaaa
ccgcaggaggcggagccacagaaggagaaactgcaggaagcagagccacaggatcctgaa
ccaatggaggagtccaatgcagctgattaa
DBGET
integrated database retrieval system
