Crassostrea virginica (eastern oyster): 111119066
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Entry
111119066 CDS
T09197
Name
(RefSeq) WD repeat-containing protein 76-like
KO
K24755
WD repeat-containing protein 76
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvn04121
]
111119066
03036 Chromosome and associated proteins [BR:
cvn03036
]
111119066
03400 DNA repair and recombination proteins [BR:
cvn03400
]
111119066
Ubiquitin system [BR:
cvn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
111119066
Chromosome and associated proteins [BR:
cvn03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
111119066
DNA repair and recombination proteins [BR:
cvn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
111119066
DSBR (double strand breaks repair)
Other DSBR factors
Others
111119066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_EIPR1
Beta-prop_RIG_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
111119066
NCBI-ProteinID:
XP_022314589
UniProt:
A0A8B8CFM9
LinkDB
All DBs
Position
1:31999796..32006992
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AA seq
543 aa
AA seq
DB search
MPTTRRSLIKRLSPEADNPREKKKAKDGLTSIKTEPKKPLTPIISNVQIPRSPCKWSKLE
ASGFNEETTNSEDEEEDEFDLEARRQKNLQDNAEIFSNLGFQEAKVQLQMSSTKYKPKSA
TKKVKAPKSPQAPKRRSMRLQRIDPEGQPLPELPVEEPPVDEHARKPSGPINMMDALHTG
NSVEDHSLLMSRLEDVKGEAKTVDSRSVTEFTKALNKLTLRADRVAKVVPDRIFSLAIHP
TEDKMLVMAGDKWGKLGFWDVVQDKGSDTDGIIVYQPHSRPINDLHVSPYNNLHVVSCSY
DGTSRCCDLQKSVFDEVYATDEDDDNLLKNFDFLSADTIVYSQQDGTVALVDRRTPGTEA
EHVYVVHPRSLRTVSVHPVARHLIVTASTDCTAKIWDIRNLKSGGKSNKWLDQIGHSKNV
YSAYFSPLSGKYILTTSLDATLNVVECNDSGKLGKRKVIKHNNHVGRWLTPFRAAWHPAR
EDVFVVGSMERPRRIQVFDCGGNILRNLSDPETLGSVCSLNVFHPTQNILVGGNSSGRVH
VFM
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccacgcgacgaagtctgatcaaacgattatccccagaggctgataatccacga
gaaaaaaagaaagctaaggatggtctgacgtccattaaaacagagccaaaaaagcctttg
actcccattatttccaatgttcagatcccacggtcaccttgcaagtggtcaaagctggag
gcctcggggttcaatgaagaaacaaccaacagtgaggacgaggaagaggatgaatttgac
ctggaagctagaagacagaagaacctacaggacaatgcagaaatcttctccaacctgggt
ttccaagaggctaaggttcaactacagatgtcttcaacaaagtacaagcccaaaagtgca
acaaaaaaagtgaaggcaccaaaatctcctcaggcccccaagaggaggagcatgagactg
cagcgaatcgacccggagggacaacctttgccagaacttcctgtggaggagccacctgtt
gatgaacatgcaaggaagccatctggtccaatcaacatgatggatgccctgcacactggt
aactctgtggaggatcacagccttctcatgtcacggctagaggatgttaaaggggaggcg
aagacagtagactccagatctgtcaccgaatttaccaaagctttgaacaaactgaccctg
cgtgcagacagggtggccaaggtagtgcctgacaggatattctcccttgccattcatccc
acagaggacaagatgctggtcatggcgggagacaaatggggaaaactgggattttgggac
gttgtgcaagacaaagggagtgacacagatggtattattgtctatcagccccactcgcgt
ccaatcaacgaccttcatgtgtcgccatacaacaatctacatgtcgtctcctgtagttac
gacggaacgtcccggtgctgtgatttacaaaaatcagtgtttgatgaggtttatgccact
gatgaagatgatgacaatctcctgaagaactttgacttcctgtcagctgacacaatcgtg
tactcacagcaagacggcaccgtagcactggttgatcggagaacacccgggacagaagct
gagcatgtttatgtggtacatccacgatctctacggacagtgtctgttcatccggtcgcc
agacacctcatcgttacagcaagcactgactgtacagccaagatttgggacataagaaat
ctgaaatcaggtgggaagtccaacaaatggctggaccagatagggcacagtaagaacgtg
tacagtgcctacttctctccccttagtgggaagtacatcctcacgacctcactggacgct
acactcaatgttgtggagtgtaatgactcaggaaaacttggaaagagaaaagttatcaaa
cacaacaatcatgtggggaggtggctgaccccattccgtgccgcgtggcacccggcccga
gaggacgtgtttgttgtggggagtatggagaggcccaggagaatccaagtgtttgactgt
ggcggtaatattctgcgtaacctcagtgaccccgagaccctggggtctgtgtgctccctg
aacgtgttccaccccacccagaacatactagtgggaggcaactccagtggcagagtccat
gtcttcatgtag
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