Crassostrea virginica (eastern oyster): 111119147
Help
Entry
111119147 CDS
T09197
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 2-like isoform X1
KO
K17908
autophagy-related protein 18
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04136
Autophagy - other
cvn04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
111119147
04136 Autophagy - other
111119147
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvn04131
]
111119147
03029 Mitochondrial biogenesis [BR:
cvn03029
]
111119147
Membrane trafficking [BR:
cvn04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
111119147
Mitochondrial biogenesis [BR:
cvn03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
111119147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
WD40_MABP1-WDR62_2nd
WD40_WDHD1_1st
WD40
ANAPC4_WD40
VID27
Beta-prop_Vps41
BCAS3_WD40
Beta-prop_NWD2_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
EIF3I
Motif
Other DBs
NCBI-GeneID:
111119147
NCBI-ProteinID:
XP_022314714
UniProt:
A0A8B8CHQ0
LinkDB
All DBs
Position
2:14106643..14117909
Genome browser
AA seq
497 aa
AA seq
DB search
MNLATKTGDEQSDLLFVNFNQDCTSLAVGTRTGYKLFSLSSVDKLEQIYDNESEDICIVE
RLFSSSLVAIVSLSSPRKLKVCHFKKGTEICNYSYSNSILAVRLNRQRLIVCLEESLYIH
NIRDMKVLHTIRDTPPNPHGLCALSINNDNCFLAYPGSNQIGEVQIFDTINLRAVTMIPA
HDNPLASLAFNAQGTKLATASEKGTVIRVFSIPDGQKLFEFRRGVKRCVSIYSMAFSADS
LFLSASSNTETVHIFKLEIPKDSRPAEQEPQGWMGYFGQALKSSATYLPSQMTEMFNQGR
AFATARLPNSGMHNVCALATIQKVPRQLVVSQDGYLYIYNLDPNEGGECMLLRQHRLDGR
AGDSPVPEVNPTDRPLTHPTSGASYASSVKKPESSVVPPGKAWESGNQGAPPSPVCVAPG
HVIGSYAAVLKKKGGPQEIEPLSPSCEIDEILCGPESQPYQELEHGSGAQPEGEGTGLGH
LRLDDDNEFPPMTHKSD
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcgcaactaaaaccggggacgaacagtctgacctcctgtttgtgaattttaat
caagattgcacatcgttggcagttggaaccagaacaggatacaaattattttctttgagt
tcagttgataaattagaacaaatttacgataatgaaagtgaagatatttgcatagttgag
agacttttctccagcagtctagtcgccatagttagtctctcatccccaagaaaactaaaa
gtgtgtcacttcaaaaaaggaacagaaatatgcaactacagttactccaactctatatta
gctgtacggttaaacagacagcgactgatagtctgtttggaggagagtttatacatccac
aacatacgagacatgaaggtcctgcatacgatccgagacacccctcctaacccccacggt
ctgtgtgcgctgtcaatcaacaatgacaactgctttttggcctacccaggcagcaaccag
attggagaagtgcagatatttgacactatcaatttgagggctgtaaccatgattcctgct
cacgataatccactggcgtctcttgcatttaatgctcaaggaaccaaactagccactgct
tctgaaaagggtactgttataagagtgttctcaatccccgacggacaaaagttgtttgag
ttcagaaggggtgtaaagaggtgtgtgagtatatactcaatggccttcagtgcagattcc
ttgtttttatcagcatctagtaacacagagactgtacatatattcaagttggagatccct
aaagatagcaggccagctgaacaggaaccccaaggctggatgggctacttcggtcaggcc
ctgaagtcctccgcaacctacttacctagtcagatgaccgagatgtttaaccagggccgg
gctttcgcgacggcccgcttacccaactcagggatgcacaatgtctgtgccctggccacg
atacagaaagtacccagacaactggtggtttcacaagacggttacttgtatatctacaat
ctggatccaaatgaaggtggagaatgcatgctgttgagacaacacagactggatggcagg
gcaggagacagtccagtgccagaggtaaaccccactgaccgacctttgacccatccaaca
agtggagctagttacgcttcatctgtcaagaaacccgagtcttcagttgtaccaccaggt
aaggcttgggagtccggcaaccagggggcgccaccttcccccgtctgtgtggccccaggt
catgtgattgggagctatgcggcggtgttgaagaagaaaggggggccacaggaaatcgaa
ccactgagtccttcatgtgaaattgatgagatattgtgtggcccagaatcacagccatac
caagaactggagcatgggagtggggcacagcctgagggggaggggacggggctgggtcat
ttacgattggacgatgataacgaattccctcctatgacacacaagagtgattaa
DBGET
integrated database retrieval system
