Crassostrea virginica (eastern oyster): 111119233
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Entry
111119233 CDS
T09197
Name
(RefSeq) LOW QUALITY PROTEIN: serine/threonine-protein phosphatase PP1-like
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111119233
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cvn01009
]
111119233
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvn03021
]
111119233
03019 Messenger RNA biogenesis [BR:
cvn03019
]
111119233
03041 Spliceosome [BR:
cvn03041
]
111119233
Enzymes [BR:
cvn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
111119233
Protein phosphatases and associated proteins [BR:
cvn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
111119233
Transcription machinery [BR:
cvn03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
111119233
Messenger RNA biogenesis [BR:
cvn03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
111119233
Spliceosome [BR:
cvn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
111119233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
111119233
NCBI-ProteinID:
XP_022314921
UniProt:
A0A8B8CKK3
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All DBs
Position
2:complement(49323528..49332701)
Genome browser
AA seq
308 aa
AA seq
DB search
MTKDIDVDSIIEQLLTAKDSSSKQVQLPETQIRQLCQLSREIFLEQPMLIEITAPVTICG
DIHGQYEDLMRHFDNCGFPPESNYLFLGDYVDRGKRSLETICLMLAYKIKYPNNFFLLRG
NHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAALVEDTIFXMHGGLSPDLMDL
KQISELERPLDVPDHGLICDLLWSDPDEDITGWGENDRGVSFTFGGDIVKEFLKKHNFSL
VVRAHQVVEDGYQFFQKRRLLTLFSAPNYCGEFDNAGAVMRVTDDLTCSFKILEPKTEKT
VAVTKGKK
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagacattgatgtggattctatcattgagcaactgctcacagccaaagattca
tcatcaaaacaggttcagttacctgaaacacagattcgtcagttatgtcagctctccaga
gaaatctttttggagcagccaatgttgattgagattacagcaccagtgactatatgtgga
gacattcatggacaatatgaggatttaatgaggcattttgataattgtggatttcctcca
gagtcaaactacctattcctgggtgactatgtagatcgtggaaagaggtctctggaaacc
atatgcttgatgctggcctacaagatcaaatacccaaataatttctttttgctgagagga
aatcatgagtgtgcctctataaacaggatttatggtttttatgatgaatgcaagaggagg
tacaatataaagttgtggaaaacttttacagactgtttcaactgtctacctgtagccgca
ctagttgaagataccatatttngtatgcatggtggactgtcaccagatttaatggaccta
aagcagatatccgagctggagagaccactagacgtcccagaccatggactcatttgtgat
ctactgtggtcagaccctgatgaggacatcacaggatggggagaaaatgacagaggtgtc
tccttcactttcggtggggatattgtcaaggagtttttgaaaaaacacaatttcagcctt
gtggtcagagcacatcaggttgtagaagatggttaccaattctttcagaaaagaagattg
ctgactttgtttagtgcaccaaactattgtggtgaatttgataatgctggagctgtaatg
agagtaactgatgatttaacctgctccttcaaaatacttgagccaaaaacagagaaaact
gtagctgtaacaaaaggaaagaaataa
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