Crassostrea virginica (eastern oyster): 111119354
Help
Entry
111119354 CDS
T09197
Name
(RefSeq) probable proline--tRNA ligase, mitochondrial
KO
K01881
prolyl-tRNA synthetase [EC:
6.1.1.15
]
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
111119354
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cvn01007
]
111119354
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cvn03016
]
111119354
Enzymes [BR:
cvn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
111119354
Amino acid related enzymes [BR:
cvn01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
111119354
Transfer RNA biogenesis [BR:
cvn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
111119354
Prokaryotic type
111119354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
USP7_ICP0_bdg
TackOD1
tRNA-synt_2
HypA
Zn_ribbon_8
RUBY_RBDX
Motif
Other DBs
NCBI-GeneID:
111119354
NCBI-ProteinID:
XP_022315130
UniProt:
A0A8B8CHE4
LinkDB
All DBs
Position
2:complement(18189397..18198765)
Genome browser
AA seq
465 aa
AA seq
DB search
MKQLVVRTASWRTINGLLPSLRKSLLRRMLHDKPKCLSEMFQKMTDIPKQGEITSVSHRL
FMANGIYYPSSLGVFTLLPKGLRVLQKLIKLIDQEMEAIGAEKIQMPSLVPRRLWEKTGR
WEAAGTEIFRLEDRHKRGYCLGPTHEEIVTEMVASQLNFHHQLPIKLYQITKKFRDEPLP
HHGFLRSREFEMKDLYTFHATEQDARETYQQVLQAYENILNRLQLHFVKAEADTGMIGGS
QSHEFHLKCPGVGEDVVYTCNSCGYSGNKEVLEKEECPSCKSQDLESYNAIEVGHAFLLG
QRYSKPLGAMFRTQEQKSRVLEMGCYGLGVSRILQASVEVLTDGKHIRWPKLIAPYQIII
IPQKKGMSEDKFQEITENLYQRLQSVPSLKGEVLIDNRLSITIGRRVVEAKLQGYPYAIV
IGNEAIEREDGLEVIDIYSDSKSIKNLTLSQVIDFLCKNAICTAE
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagcttgtagtgaggactgcttcatggaggacaatcaatggcctccttccatcc
ctcagaaaaagtctacttcgtagaatgttacatgataagccaaagtgtttgtcggaaatg
ttccagaaaatgacagacattcctaagcaaggggagataacttcagtcagccatagacta
tttatggccaatggcatttactatcctagttccttgggtgtgttcacattgttaccaaaa
ggacttcgagttctccagaaacttataaaacttattgaccaagaaatggaagccattgga
gcagaaaaaattcagatgccatcattagtgcccagaagactttgggagaagacagggaga
tgggaggctgcagggacagagatttttcgactagaagacagacataaaaggggctattgc
ttaggtcctacacatgaagagatagttacagagatggttgcaagtcaactgaacttccac
catcagctgcctatcaaactgtatcagatcactaagaaattcagagatgaaccattgcct
catcatggattcttaaggagcagagaatttgaaatgaaagatttgtacaccttccatgct
acagagcaggatgcgagggaaacataccagcaggtgctccaggcctatgagaacatactc
aacaggctacagctacactttgttaaagcggaggcagacactggcatgattggaggttca
caatcacatgagtttcacctgaaatgtccaggtgttggagaggatgttgtttacacctgt
aatagttgtggatacagtggaaataaagaagttttggagaaggaggaatgtccatcatgc
aaatctcaggatctcgagtcatataatgcaatagaggttggtcatgcttttctccttggt
caaagatactcaaagccactgggtgccatgttcagaacacaagaacaaaagtcaagagtg
ctggagatgggatgttatggattaggggtatccaggatcttacaagcatcagtagaagtc
ctaacagatggaaaacatataaggtggccgaaactaatagccccttatcaaatcattatc
ataccacaaaagaaagggatgtctgaagacaaattccaagaaataacagagaacttatac
cagagactgcagtctgttccgtcgctgaaaggggaagttctaattgacaacaggctctct
attactattggacgaagagtggtagaggccaaactgcaaggatacccatatgctattgtc
attggtaacgaggctattgaaagagaagatggattggaagtgatagacatttattctgat
tctaaatccataaaaaacttaacactgtctcaagtgattgattttctgtgtaaaaatgct
atctgtacagcagaataa
DBGET
integrated database retrieval system
