Crassostrea virginica (eastern oyster): 111119382
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Entry
111119382 CDS
T09197
Name
(RefSeq) LOW QUALITY PROTEIN: nipped-B-like protein
KO
K06672
cohesin loading factor subunit SCC2
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvn03036
]
111119382
Chromosome and associated proteins [BR:
cvn03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
111119382
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
Cnd1
DUF5359
Motif
Other DBs
NCBI-GeneID:
111119382
NCBI-ProteinID:
XP_022315201
UniProt:
A0A8B8CLG8
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All DBs
Position
2:30169329..30190961
Genome browser
AA seq
1976 aa
AA seq
DB search
MNSDVPSVPITTLAGIHSLTDLLPELPLPTPTSSTTHNKTLLHNDKLKETSKRLLASRDA
GLTQQLVGVLRETSTELLELKDSSVGSGFDRNSPELLKSILSQDPTLFQGGHYYENGSQK
DGYNLGNQHYQNNVLGGDPNKYQHPYGSYTPGIVNGEHPELSNQYPGYQGAAKSLGTIAS
PAQGSLAENSFYHSAENHADVTSSYAKRLKNSDPVVILEPLTNLPPHASGDASSTASAES
YSEKKKKKSSHPVVLLEPLDEKTLKSIKHAGSVKTKEGKKRGRLYDSDEEYDDRHKKRRY
HSDSDSDSQAEVSRKKKKDKRHRRVNQQSLTVEELLESPTFKKFSASMEYILEASEDTNF
GSLDTNDDEVECPTESLIANNLLNDLCGETAKLKSLGVMNQVPADRLVKLLTILQWNIRD
GTKVTPIANQGQDEDEEEQKLWRSLIMERVMRSMNSVLIALHIMTSPDMPKQVYLEDVIE
RIILFGKFQLQNTIFPEFDPVYKIDPKAKDGYHGSLKAKRARATQVKHKSTINLFNKISD
MIXKLAELVDIQELTDTTILQLSTLGVSPFFVENISEMQLNSMKLVTTIFSKYEKHRQLI
LEDIFASLARLPSSKRNLRNYRLNSEESIQMVTALALQLIQCVIRLPTTSSSLEPPTEEE
VPSSSSKKAQKSRRGQNSNDVVIVTSFENALRTGYNFLTVFLQKCTVKSEEDYRPMFENF
VQDLLSTVNKPEWPSSELLLSLLGKILVKQFSNKSVDMSLRVASLDYLGIVASRLRKDAV
SSQDNQESIDEIVTKVTSKDSDEEEPHEDAKSTTSGPEAEDQTQILQKAMLDYLAYNSQS
EPAYWYAHLFYIAQWYRDCTVEADNVSKNSNKRKSEEDEENNAEAMQNAEQKKAFLLAQF
ESINKNASYRPPLSKLDYDGACLVARYLSSKRPFAKSFDVYLTQILRVLNESAVAVRTKA
MKCLTAVVEADPGILARADMQKGVHYRFLDSSTSVREAAVELVGRFILIRPELISQYYEM
LSVRILDTGISVRKRVIKIFRDICLEQPDFPKIPEMCVKMIRRVNDEEGIKKLVNEVFQS
MWFTPISSREKDTSKLLTRVLNITDVVAACRDTGFEFFEQMLENLLKKDEEGNINKSALT
SCRQIVDCLVENVLRLEEKSVDSDTGKGCSQRLVACLSTLHLFGKIKPDLMVKHATTLQP
YLDIKCSTQGDHFVLHYVARILEMVVPLMDHPSETFLAQLEMDMMKLILKHGMMVVESCI
SCLGAVINCVSHNYPLVKDCFEKFFGVLVKLCADHKEDPLNPQLKARKPTLLRSLFTVGL
LCKYFDLDKDLADISLESQETIRERVFEVLMYFVNHEDEIVKEKALSGLGFMVIRHYDIM
LGREMRDLYYEYLDNEGSPDKLRIQVLRNLQNYLLEEEIRMHKADADWRKHAKEEDLKEM
GDVQSGMASTIMQVYLRHVLDSFFHTHSQVRLAAIQVVVLVLQQGLVHPVQCVPYLISMC
TDTEKVIRVKADQQLQEIDKKYPGFIHMKAFQGLMMSYKLQQLLQSNSKSCVIRGHRECD
GNTISLNNFLYTVLRTNRSHRRAILLSLLNLFDDSAKISLAEQLYIADNLAFFPYQTQDE
PLFIINQIDIIVSLSGSNILQSFKERLRLPNPEAPSMNILVNAEGGNQTENGGLPRPAVE
EEEDEDDPDKLMAKLPVDIQPXLDICYLAQGCILLLHLKHHLKETYGFSDSKIHNYSQTD
AKTYDKPVQRKFIVTFNPETVINLLNNKNKNRTIKKRARRSQKRHRNDSGELSSDSSESS
EEESQCEEEPQNDDIEQRRKLIDDYLEFKDLMLSIDPPDDEEEGGEENRSTGHQTPNPAH
GQTTPGSKSPRLPNPEGTTAEESSEMSVEVHEETSEKKVPPIIIRTHTPKSSRHHHLFTS
DKKKIPVHPSSSSTSSSKNLAKSFSKSLSNKKKPKKRRKRYGSDSEDDSDDSDFVL
NT seq
5931 nt
NT seq
+upstream
nt +downstream
nt
atgaatagtgatgtgcccagtgttcctataacaacactagcaggcattcacagtcttaca
gaccttttaccagagcttccgttgccgaccccgacatcatctactactcacaataagacc
ctgcttcataatgacaagctgaaagaaacatccaagcgcttgcttgccagtagggatgca
ggacttacacaacagcttgtgggggtgcttcgggaaacgtcgactgaacttttggaactg
aaggattcgtctgttgggtcgggatttgacaggaattctcccgagttactaaagtctatt
ttaagtcaggatccaactttatttcaaggtggacattactatgaaaatgggtcacaaaaa
gatggatataatctaggcaatcaacactaccaaaataatgtgctgggtggtgatcccaac
aagtatcagcatccctatggcagttacacaccaggcatcgttaatggagaacatccagag
ctatccaatcagtacccagggtatcaaggagctgctaaaagtttgggaacaattgcttca
ccagctcagggaagtttagcagagaactccttctatcattcagcagaaaaccatgctgat
gtcactagttcttatgccaagaggctgaagaattctgacccagttgttattctagaaccg
cttactaatttaccacctcatgcctctggtgatgcatcaagcacagcctctgctgagtcc
tacagtgagaaaaagaagaagaaaagttcacatccagtggtgctgctagaacctcttgat
gagaagactttgaagtcaataaaacatgcaggctcagttaaaacaaaagaaggaaagaaa
agaggcagactatatgacagcgatgaggagtatgatgaccggcacaagaaaaggaggtac
cacagcgacagtgactctgattctcaggctgaagtgtcgaggaagaagaagaaggacaag
cgtcaccggcgtgtgaaccagcagtcactgacggtggaggagctgttggagagccccacc
ttcaagaagttcagtgcctccatggagtacatcttggaggcatctgaggacaccaacttt
ggatccctggataccaatgatgatgaagtagagtgtcctacagaaagtcttattgcaaac
aaccttttaaatgatctttgtggagaaactgctaaactgaagtccttaggagtcatgaac
caggtgcctgcagacagacttgtcaagcttctgacaattctacaatggaatatacgagat
ggaacaaaagtcactcctattgcaaatcaaggacaggatgaggatgaggaggaacaaaag
ttgtggaggagtctgatcatggagcgggtcatgaggagcatgaactcggtcctcatagcc
ctccacatcatgacctcacctgacatgcccaaacaggtttacctggaggatgttatagag
aggatcatactgtttgggaaattccagcttcagaacaccatcttcccagaatttgatcct
gtctacaaaattgaccccaaagctaaggatggatatcatggaagtttgaaggccaagaga
gcaagagctacacaagtaaagcacaaatctaccataaatctattcaacaagatctctgat
atgattngaaaactagcagaattagttgatattcaagaactcacagacactaccatccta
cagctttcgacattaggagtgtctcctttctttgtggaaaacatcagtgagatgcagctg
aattcaatgaaacttgtaaccacgatcttctcaaaatatgagaaacatcgccagttaatt
ctagaggacatttttgctagtttagcaagacttccgtcaagtaaaaggaacctgagaaat
tacaggttgaactctgaggagtccattcagatggtgactgccctggcattgcagttgatt
cagtgtgttattcgcctgccgaccacctcctcctcactagaaccccccacagaggaagaa
gtcccgtcatcgtcatcaaagaaagcccagaaatcccgacggggacagaattccaatgat
gttgtcattgtcacctcctttgagaatgcattaaggacggggtataatttcctcaccgtg
ttcttgcaaaagtgcactgttaaaagcgaggaggactacagacccatgtttgagaatttt
gttcaggatctcttgtctacagttaacaaaccagaatggccatcttcagaactcctgcta
agtctgttaggcaaaatactggtgaaacagttcagcaataaatcagtggacatgtccctc
agagtggcctcccttgactatctgggaattgtggcttcaagattaaggaaagatgcagta
tctagtcaggacaaccaggaatctattgatgaaatagttacaaaggtgacctcaaaagac
agtgatgaggaggaaccacatgaggatgccaagtcaaccacctcagggcctgaagcagag
gatcagacacagattttgcagaaagctatgttggattatctggcatacaacagccaaagt
gaaccagcatactggtatgcccacctgttttacatagctcagtggtacagagattgcact
gtagaagcagataatgtctctaaaaattcaaataaacgaaagtcagaggaagatgaggag
aacaatgctgaggccatgcagaatgctgaacagaaaaaagcatttctgctggcccagttt
gagtccatcaataagaatgcttcatacaggcctcctctttccaagctggattatgatggt
gcgtgtcttgttgcaagatacctatcctccaagagaccttttgccaagagttttgatgtg
tacctgacccagattctgcgggttcttaacgagtcagctgtggctgtaaggacaaaagct
atgaagtgtttgacagcagtggtggaggcagaccctggaatcctggctcgggctgacatg
cagaaaggtgtgcattaccgcttcctagattcctcaacgtctgtccgagaggcggcagtg
gagttggtgggaaggtttatactcatccgtccagaactgatatctcagtattacgaaatg
ctctctgtccgcattctggacacaggtatcagtgttagaaagcgggtcatcaagatattt
cgtgatatttgcctggagcagccagactttcccaaaattcctgaaatgtgtgtgaaaatg
attcgtcgagtgaacgatgaggagggaatcaagaaacttgtaaatgaagtgttccaatcc
atgtggtttacaccaatcagcagtcgagagaaggataccagcaaactcctaaccagggtg
ctaaatattacagacgttgtggcagcatgtagagatacaggatttgaattctttgaacaa
atgttagaaaatttactaaagaaagatgaggaaggaaacatcaataagagtgctctgacc
tcctgtcgtcagatagtggactgtctggtggagaacgtcctcaggctggaggaaaagagt
gtggactctgacactgggaaaggctgcagtcaaagactggtggcctgtctatccactctg
catctctttggcaagatcaaaccagacttgatggttaaacatgccactacactccagccc
tacctcgatatcaagtgcagtacccagggtgaccattttgtgctgcactacgtggcacgg
atccttgagatggtggtgccactgatggaccacccgagcgagacctttctggcccaactt
gagatggacatgatgaagcttattttgaagcatggaatgatggtggttgagagttgcata
agctgtctaggtgcagtcatcaactgtgttagtcacaattatcctttagtgaaggattgt
tttgagaagttctttggtgtcctggtgaagctgtgcgcagatcacaaagaagaccccctc
aacccccagctgaaggcgcggaagcccaccctcctccgctccctcttcacagtgggcctg
ctgtgtaaatactttgatctggacaaggacctggcagatatctctttggagtcgcaggag
actattagggagagggtctttgaagtattgatgtactttgtgaaccatgaagatgaaatc
gtgaaggagaaggcactgagtggtctggggttcatggtcattcgacattacgatatcatg
ttggggagggagatgagagatttgtactatgagtacttggataatgagggttcccccgac
aaactcaggatacaggttttgagaaatcttcagaactacttactagaagaagagatcaga
atgcacaaagctgatgctgattggagaaagcatgcaaaagaagaagatcttaaagaaatg
ggtgacgtgcagtcagggatggccagcaccatcatgcaggtttacctgaggcacgtcttg
gactccttcttccacacccactctcaggtgcggctggctgccatccaggtggtggtgctc
gtattacagcaaggcctggtccacccagtgcagtgtgttccctatctaataagcatgtgt
acagacacagagaaagttatacgagtaaaggcagaccaacagcttcaagaaatagacaaa
aaatatccaggatttattcatatgaaagctttccagggtctgatgatgtcctacaaactg
cagcagttacttcagtccaacagcaagagctgtgtgatccgtggccacagagaatgtgat
ggcaacaccatcagtctcaataatttcctctacaccgttcttcggaccaaccgctctcat
cgacgtgccatactcctctccctgctaaatctctttgatgactccgcaaaaatctcactg
gcagaacagctgtatattgcggacaatctggccttcttcccctaccagactcaggacgag
ccattgtttatcatcaaccagattgacatcattgtatctctgtctggctctaacattctt
cagtcctttaaagagcgtttacgtttgcctaatccagaagccccaagcatgaacatattg
gtcaatgccgagggtgggaatcagactgagaatggagggttgccccgccctgctgtggag
gaggaggaagatgaggatgatccagacaaactcatggcaaagcttccagtggatatccaa
cccntgttggatatttgttacttagcacagggctgtatcttgctattgcacctgaagcac
cacctaaaagagacctatggattttctgacagcaaaattcacaactactctcaaacggat
gcaaagacttatgataaaccagtgcagaggaaattcatagtgacgtttaaccctgagact
gtgataaatttgttgaacaataagaataaaaataggactattaagaaaagagcaaggcgg
tcccaaaaacggcatcgcaatgattcaggggagttatctagtgacagtagtgaatccagt
gaagaagaatcgcagtgcgaagaggaaccacaaaacgacgacatagaacaaagacgcaag
ctgatcgacgactatctagagtttaaggatctgatgttgagtatcgaccctcctgatgat
gaggaggagggaggagaggagaatcgcagcactggtcaccagacccccaaccccgcccac
gggcagaccactccaggcagcaaatcaccacgactaccaaatccagaaggaacgacggca
gaggagtcgtccgagatgagtgtagaagttcacgaggagacctcagagaaaaaggttccc
ccaatcatcattagaactcatacacctaaatcctcgcgacatcatcatctcttcacttct
gacaaaaagaaaattccagttcacccttcatcttcatcaacctcttcttccaaaaactta
gcaaaatcattctccaagtccttatccaataaaaagaaaccaaagaagcgacggaaaaga
tacggcagcgacagtgaagatgacagtgatgatagtgattttgtgttataa
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