Crassostrea virginica (eastern oyster): 111119397
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Entry
111119397 CDS
T09197
Name
(RefSeq) polycystic kidney disease 2-like 1 protein isoform X1
KO
K04986
polycystin 2
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cvn03037
]
111119397
04040 Ion channels [BR:
cvn04040
]
111119397
Cilium and associated proteins [BR:
cvn03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
111119397
Ion channels [BR:
cvn04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
111119397
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
YVC1_C
EF-hand_1
Fer4_24
EF-hand_7
EF-hand_6
DUF6693
Motif
Other DBs
NCBI-GeneID:
111119397
NCBI-ProteinID:
XP_022315229
UniProt:
A0A8B8CJ84
LinkDB
All DBs
Position
2
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AA seq
858 aa
AA seq
DB search
MTSRDNRPTSAQSRTAWGDMDSGYGRPDNQFEFGPRDDPDLPVAMENDIYMDRDKGKNEV
ATTKLPTEKQGCFTRFGKGVRSLWATRQTEETKGNRELHVKTTLRELIIYLVFLIILCVV
TFGMTSTTMYYYTKVMSDLFLDTTHESGGTFRTITNVEDFWKFARGPLVRGLHWETWYNN
DALPPSEQGYIYYENKLLGLPRLRQLKVSSNSCVVHENFKDVIRECYDSYSSNLEDKTSV
VNLDNYTAFTYKTEEELDGSSHEATIATYSGAGYVQNLGKTQNESLEVINYLFKKLWITR
GTRVAFVDFTVYNANINLFCAIRLIVEFPATGGAIPSWDFRTVKLIRYVTIKDYFIMACE
FIFVLFIAYYIVEEALEIKKHKLSYFKSLWNILDLTVIIIALLCIAFDIYRTVEVDNKLS
ELISHPDQYADFEFLSYWQTRFDNAIAIAVFFAWVKIFKYISFNKTMTQLSSTLGRCAKD
LLGFAVMFFIIFLAFTQLGYLLFGTQVKDFSNFGNSFFTLFRIILGDFDFHQLEAANRYL
GPIFFMLFVFFVFFVLINMFLAIINDTYSEVKGDMANQMNEFEMTDYFKRGYQKMVDKLN
LKRDKIQDIHETLKHADINGDDKLDFDEWRQDLKTRGYADGEIEALFAKYDIDGDRVLDK
DEQIRMQEDLNNQKAALNKEYDELEKSGNRPGTARRASSRISENDDSGDESSEMDENGSK
STRSGRGSNGVSYEEFTVLSRRVDRMEHSIGSIVSKIDAVLVKLEAMEKAKLKRRETMGK
ILDSITETDGSNSDEMKREQMEKLVREELERWDSETSFSPSGRGASPSSGSSARGVRARS
RPGSGQHGDYYDSRGYHA
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgcgggacaatcgtcctacaagtgcacagtcacgcacggcttggggagacatg
gattccggttacggtagaccggacaatcagtttgagtttgggccaagggacgatccagac
ttaccagtggcaatggaaaacgacatctacatggatcgcgacaagggaaagaatgaggtg
gccaccaccaaactgccaactgagaagcagggatgcttcacacgattcggaaagggagtc
agatctctgtgggcgaccagacagacagaggagaccaaggggaacagagaactccatgtg
aagaccacactgagagagctcatcatctaccttgtattcctcatcatcctctgtgttgtg
acatttggaatgacctcgaccactatgtactactacactaaggtcatgagcgacttgttc
ttggacacaacccacgagtctggtggtactttcaggacaatcactaatgttgaggatttc
tggaaatttgcccgtgggcctctggtccgtggtctacactgggaaacctggtacaacaat
gatgccctgcccccctctgaacaaggatacatttactatgagaacaaactcctgggactg
ccccgactccgacaactcaaagtcagctctaactcctgtgtggttcacgagaacttcaaa
gatgtcattcgtgaatgctacgactcctactcctccaatctagaggataagacatcagtg
gttaatcttgacaactacactgcattcacctacaagacagaggaagagctggacggaagc
agccatgaggcgaccattgcaacatacagtggagctggttatgtccagaatctcggcaaa
actcagaatgaatcattggaggtcataaattacttgtttaaaaaactgtggataactcga
gggactagagtggcttttgttgatttcactgtgtacaacgccaacatcaacttgttttgc
gctattcgtctgattgttgaattcccagccacagggggagcaattccttcatgggacttc
cgaaccgtcaaactgattcgatatgttaccatcaaagactacttcatcatggcctgtgaa
ttcatatttgttctcttcattgcctactacattgtggaagaagcccttgagatcaagaag
cacaagctgtcctacttcaagagcctgtggaacatcctggatctgactgtcatcatcatt
gccctgctttgtatagcgtttgacatatatcggacagtggaagtggacaataaactcagt
gaactcatcagccacccagaccagtacgccgactttgagttcctcagttactggcagacc
agatttgataatgctatcgctattgctgtgttctttgcctgggttaagattttcaagtac
atcagtttcaacaagaccatgacccagctgtcctcgaccctcggacgttgcgccaaggat
ctacttggattcgccgtcatgttcttcatcatcttcttggctttcacccagctcggatat
ttactatttggaacccaagtcaaggatttcagcaatttcggcaattccttcttcaccctg
ttccgtatcatcctgggagactttgacttccaccagctggaggcggccaacagatacctg
ggaccgatcttcttcatgctgtttgtcttcttcgtcttcttcgtgctgatcaacatgttc
ttggccatcatcaacgacacctactctgaagtgaagggtgacatggctaaccagatgaac
gagtttgagatgacagactacttcaagaggggataccagaagatggttgacaaactgaac
ctgaaacgtgacaagatccaggatatccatgagactctcaaacacgccgacatcaatgga
gatgacaaactggactttgatgaatggagacaggacctcaaaacacgtggatatgctgat
ggagaaattgaggctcttttcgccaaatacgacatcgatggagatcgtgttttggacaag
gatgaacaaatcagaatgcaggaagatctcaacaaccaaaaggctgctctcaacaaggaa
tacgatgaactggagaaaagtggaaaccgaccaggaaccgcacgcagggccagcagcaga
atcagcgagaacgacgacagcggagacgaaagctcagaaatggacgagaatggctccaag
tccaccagatccggcaggggctccaatggggtgtcatacgaagaattcacagtgttatcc
cgcagggtggatagaatggaacattctattggcagcatagtttctaagattgatgctgtt
ttagtcaaattagaagccatggaaaaagcaaaactcaaacgcagagaaacaatgggcaaa
atattagacagcatcacagagaccgatggcagcaatagtgatgaaatgaaaagagaacag
atggaaaaattagttagagaagaattagagcggtgggattcagagacctccttttccccc
agtgggcgtggggcttctcccagtagcgggagcagtgctcgcggggtcagagcaagatct
cggccaggctcaggacaacacggggattactatgactcccgagggtaccatgcttaa
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