Crassostrea virginica (eastern oyster): 111119402
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Entry
111119402 CDS
T09197
Name
(RefSeq) DIS3-like exonuclease 1
KO
K18681
DIS3-like exonuclease 1 [EC:3.1.13.-]
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111119402
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvn03019
]
111119402
Messenger RNA biogenesis [BR:
cvn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
111119402
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_Dis3
Rrp44_CSD1
CSD2
Rrp44_S1
OB_HELZ2
OB_RNB
Motif
Other DBs
NCBI-GeneID:
111119402
NCBI-ProteinID:
XP_022315246
UniProt:
A0A8B8CLL0
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All DBs
Position
2:complement(15366119..15380538)
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AA seq
1054 aa
AA seq
DB search
MVYDSKLEKSNKLLRIRSAHGKNVSVVREVYRRENVPCQSALCLSDCQNGTGDGGLSLLP
AHVNHYLVPDCQVAREFLEVLENPVVTGIIFFQTVVHSVQHEGSKRLHNRLTNLVKDKRK
ASIIFHNEFQKYAYCEREQGETLSDWQTRSIYTAAEWYFNHLAGQKPVIMVTLNKQAIET
YANKTLNVFVLSLEEYLKKFWQNNIPEVMELYESLTASLETKVKEKDYKGYLPLDILEAG
VKSGRFVQGHINVNKNNAGQEAFVKKKRSSTPDDDDDRDILIHGMPARNRAIHGDLVVVE
VLPRSEWRGRSSVIKENQEGQLEESEEDGTLDGNVMPTGRVVGILQRNWREYVASFASDE
KVSEKGGKVLVIPWDYRIPKIRISTRQVEKLKNQRIVVRIDSWEIDSQYPNGHFVKTLGP
IEDLEAEIAAILLENTIHVGAFSEAQMKELPVDTPENPWCIEEAELSRRKDLRSSHLIFS
IDPKGCEDVDDTLSVRQLDNGNLELGVHIADVTHFVKPGSLTDMEAKSRSTTVYLADRRY
DMLPGILSANLCSLISGVDRYAMSVIWELDKNFEVVNVWYGKTIIRSTYKLFYEMAQAMH
DGISMTEIIKNVPELQKLPEKDAEKRVEELRSSVTLLMRIARRLKARRVSGGALELESVE
VQIQLNETKSIEDLTPKDHLEIHDTIAECMIFANHWVALKIADVFPNQALLRHHPLPKTE
QFENLKNCAKSRGFEVKTTSNKDLAETLDNCVDSRDPVVNKILRMLATQAMSVASYFSTG
SLPRDQYFHYGLALDYYTHFTSPIRRYADVLVHRQLMAAVLAEGPEGLPGNLELDELCEH
INHQHRAAQNAQRDSQELFQYMYFKQRDLNNECCRADAIIFQLRANGLLVFVPRYGIRGP
VYLRNKDGQVLYVENTSGQVDWTSGSITKSERSITVNGLVGSQTFTLLDHITVKITPNSS
RAHASSLKLELVSTEGYALDQKMSTTEKMSKNQKQAIIQEVQAVAEEKRILSSSSEDPGH
KFLSLRAEFGQTPDSASLYSLFESFKEMAKKPIS
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atggtttatgacagtaagttagaaaaaagcaacaaactcctgagaatacgaagtgctcat
ggaaaaaacgtcagtgtagtcagagaggtgtacaggagagagaacgttccttgccaaagt
gcactctgtttgagtgactgccaaaatgggacaggagacggaggactaagtttgttgcca
gctcatgtcaatcactaccttgttcctgactgtcaggttgcgagagaattcctggaagtc
ttggagaatcctgtagtcacaggaatcatcttctttcagaccgtggttcactcagtccaa
catgagggaagtaaacgactgcataacaggttaacaaacttagtaaaagacaaacgcaaa
gcctccattatattccacaatgaatttcagaagtatgcttactgtgaaagagagcaaggg
gagactctctctgactggcaaacaaggagcatctatacagctgcagagtggtattttaac
catctagctggacagaaaccagtcatcatggttactcttaacaaacaggcaattgaaaca
tatgcaaacaagacattgaatgtgtttgttttgtccctggaggaatatctcaagaaattc
tggcagaataatattccagaggtcatggagctttatgagtccttgacagcttcattagaa
actaaggtcaaagaaaaagactacaaagggtatttgcctttggatatcttggaagcaggt
gtcaagtcaggaaggtttgtccaaggtcacatcaatgtcaataaaaacaatgccggccag
gaagcttttgtcaaaaagaaaagatcatccactcccgatgatgatgatgacagagacata
cttatacatggaatgcctgccagaaaccgcgccattcacggggatctcgttgtggtggag
gttttaccaaggtcggaatggaggggaaggtcaagtgtcatcaaggagaatcaggaaggt
cagttggaggagagtgaggaggatggtaccttagatggaaacgtcatgcctacggggcga
gtggtggggatcctacagagaaactggagggaatatgtcgcctcatttgcttctgatgag
aaagtaagtgaaaagggtggcaaagttctagtcattccatgggattatcgcattccaaaa
attcgcatcagcacaaggcaagtcgaaaaactaaaaaatcagaggattgttgttcgcatt
gactcctgggaaattgattcccaatatcctaacggacattttgtgaaaactctcggaccc
attgaggatttggaggcagagatagcggccatcctgctagaaaacacaatacatgtggga
gcattttctgaggctcagatgaaggaactccctgtggacacccctgagaacccctggtgt
atagaggaggcagagctcagcaggcggaaagatttacgctcctctcatctgatcttctcc
attgaccctaaaggttgtgaggatgtggatgacactctgtctgtaaggcagctggataat
ggaaacctggagttaggagttcacattgctgatgtcacacattttgtgaagcctggctca
ctgacagacatggaggccaagagtcgctcaactacagtctatctggctgaccgtcgctac
gacatgttaccagggatactcagtgccaacctctgctcattaatcagtggggtagatagg
tatgccatgagtgtaatatgggaactggacaaaaactttgaggttgttaatgtctggtat
gggaaaacaattatccgttccacatataaactattctatgagatggcacaagctatgcat
gatggtatatctatgacagaaattatcaaaaatgtcccggaacttcaaaaattgccagaa
aaagatgctgaaaaaagagtagaagagctgcgatcttctgtgacattgttgatgaggata
gccaggcgtctgaaggcaaggagggtgagtggaggggccctggagttggagagtgtggag
gtccagatccaactgaatgagaccaagagtatagaggacctcacccccaaagaccacttg
gaaatccatgacactattgctgaatgcatgatctttgccaatcactgggtggccttaaag
atagctgatgtgtttccaaaccaagctttgctgagacaccatcctttacctaaaactgag
cagtttgagaatttaaaaaactgtgccaaatcccgaggttttgaggtgaagacaacatcc
aacaaagatctggcagagacactggacaactgtgtggactcaagggaccctgtagttaat
aagattttaaggatgttagccacacaagcgatgtctgtagcctcctacttctcaactggt
tccctacctagggaccagtatttccactatggcctggctttagactactacactcacttc
acctccccaatcagaagatatgcagatgttctggtccaccgccagttaatggcagcagtt
cttgcagagggtccggaagggttgcctggcaatctagaactggatgaactttgtgaacac
atcaaccatcagcacagggcggcacaaaatgctcagagagattcccaagaactgttccag
tacatgtattttaaacagagagatctaaacaatgagtgttgtagagcagacgccatcata
tttcaactcagggccaatggccttttggtttttgtgccgaggtatggcatcagaggacct
gtttacttaagaaacaaggatggacaagttctgtatgtagagaatacttctggtcaggtt
gattggacgagtggtagcatcacaaagtctgagcgtagtatcacagtcaacggtctagtg
ggttctcaaacattcactttactagatcatattacagtgaaaatcacccccaacagttca
agggcccatgcgtcttctttaaaactagagcttgtgtccactgaaggatatgcattagac
caaaaaatgtctactacagagaaaatgtcaaagaatcagaaacaagccataattcaggag
gtacaagctgtggctgaggagaagcgtatcttgtcctcctcctctgaggacccagggcac
aaattcctgtccctgagggccgagtttggacagacccctgacagtgctagcttgtactca
ctgtttgagtcattcaaagaaatggcgaaaaaacctattagctag
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