Crassostrea virginica (eastern oyster): 111119493
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Entry
111119493 CDS
T09197
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 24-like
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cvn01002
]
111119493
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvn04121
]
111119493
Enzymes [BR:
cvn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
111119493
Peptidases and inhibitors [BR:
cvn01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
111119493
Ubiquitin system [BR:
cvn04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
111119493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
UCH
UCH_1
UCH_UBL1
DUF3517
UBA
UBA_7
UBA_RAD5A
CUE
Motif
Other DBs
NCBI-GeneID:
111119493
NCBI-ProteinID:
XP_022315407
UniProt:
A0A8B8CHW4
LinkDB
All DBs
Position
2:complement(1058594..1094926)
Genome browser
AA seq
2535 aa
AA seq
DB search
MEVEEEHVHTLLSMGFPESEIRRALRRAKNDLNEAVAYLTNDQTLPSDWEEVDDVEMKDV
HSRPSQTMYSPSPPPSYDEVNTMEKTDENGENGNTEEENPLEFPVTNLYELEGRVFAEHW
SIPYKKEESLGKCLIAATRLAEANLTETDEHCRRFLERCMPDSFQKLMTSGAVHRWNTEI
QEGIFNMAELFIDMCVARLQHLPIHHEILNILTLVFNKESEFHFKNRSKRDRTYWEDKLE
DGQLYTVNTGYKSSIDPYGWLTHLINRFAVKGGFNLVRKLLENEDLDAPSMAALLRPFGM
CAEFLNPKVVTEILAPGMEKTIKYIQNLEERDLKEKKIGSVSDLLASMKLLCIQMWPQHT
DSLDDLRLEVALRMLKSPHFNARMNALKEVTKLIDDTTPNKVSKTAIDYKTILQWLVENK
VLSIALEGNIDQVQYCEKVKGIVDFLGSEITLEELAMIWKMQVGQTNHVIDNIHSIIAAA
AVKFDSAQLEHLFLLIQKKWQDDHNRMKEKLLRLIGKIGRDAKEPKTTTRVLELLWDLSH
LPTLSRQLIELALEEHLAILSDSFSVREPVKRNYVIKCVEDIRKGACVLPSLKQLLYICK
NIMKQNNHKSEKGILHELNKNHDVIKLVTQSLIKLHKQALVTAGDGQLGPDSIVDTRYPH
SEFVSTHLQFLQYTLQEGALYLPWSRARDIWGTLIANTDACTWDRETCFEWFSRGLPDLE
MDTQTQLFQKELLKLDPAKLTDKGFTCFKNFFENVNKYEHRLKTDGGRLVVEKSDLLGLD
YIWEICLNTPDEAIADKAIQLLLCVSYTNLAVRLKRDTVSLHKKFISECSNRLEAAMIGM
GGTAIAQAVTWATKTLTAAIVKEVANVPPPSRSIKLMNIERLLWIAEVYVLNVEENHQTT
RIILPHGASFHGLQINLMITCESPKQEFMLLCHGNETLGSVRARIANKLRQPTDNVQVVA
QDKMLDTQKDQKLLHQLEFEDNQLIQVRLTTPTLQPLGKEPMTPTSKQNFDLEQEKMLPG
VVMAVEGQVFDMLYQLADLDEPRITHRVRKLLMLIPTDPQISETLECIANKGVKQAAEDV
SPRASPRKSASASPLPSPRLAPKDVLKSLFDASAQDMSAFRVLYNLEVLSSKLMPISVDL
ATRISSQAFCDDFLSVGGLQMVVNVLQAESLAPEVNYTIRQGCYAICLQLARFLLCGQTV
STDIDDAHGGSEETKSASSSLLASSPQNTSFVKQSAGSHTVQTMDVHTFTETVSCFLRVT
WAAAAGRLHLIGTSQAVIDSSSGHGRRSRQSSTGSTASTGSESDCQSLHAGVCAKARDIP
TTDCNIAREALEILITCLQIRCELIASFYSLPCTSDFIVDILVGCTNGDIRNAALEQFFL
LSQTECSVQHTPHHFMLQLLLKAYVPFWVSSALARGVSQRLLSQCSQYFDLLCRLLEGLS
KEDQGKLKMNPTSMLEDEVAWLGNYVPSPHPDLSDTDNSLLAGHLKLITTLITCEGVDPE
ENGRTLVYDILHDFLFPASKVMMDSMNTSSEEKLEEVNPKCSNCESRVAAYRLLIELAKG
NYSMLKDVCKQLIEMHHLPQPDCANEWEYLPPVDGRARCGFVGLKNGGATCYMNSVIQQL
YMVPGIPEVVLGTEEERPDEDSVFFQIQQVLGHLQESKLQYHEPERFWKVFKLWGQTVNI
REQQDAFDFFQALIDQIDEHLKKNGKTELFKRKFQGIFSDQKICKDCPHRYEREEAFLAL
NLTVKNATLQDSLDQFVKGELLEGDNAYFCDKCGEKRNTMKRMCIKTLPPLLCIQLKRFG
YDWEANRALKFDDYFKFPWVLDMEPYTTDGMARREEVLETVDSSSESDSGESTNQEERVL
EIVTSGNNTEHRQINYELVGIVVHSGQANAGHYYSFIKDRRGDMMSNAQKGKWFKFNDTV
VEEFEMTEDNLEAECFGGTYKAKIIEPTTTLPDERVRYWNGYMLFYEKMEEPAKTPVSAK
KSKIQTRKAVLEGGKGDLDSNSFMELTELVHKGEKKGIFMDEMPASIHQIIQAENLTFVK
NRDVYNTDYFRFIRDLVAVNMSKESHKEFQQMSVTALQLGVRFLFNTFFRCKKKTKPLLD
EWVELIDEILDKSKEACNWLVEYLSSSEGSSYIKPFLLECPCRDVRYTMARLLERLMSSH
FRHGGVPTQKCFNEIVEIILYMLNKDVVDHCKNSFHYFQVIKSYVQLGTKSCSHMFLRQG
FQRLIWFLIGNSGETNQGHDIPSRRWSSIQSREFGNLHSSLAILILNCDVSKYRTDDPGE
FEIRKPKTVFPMKFLFMPQDMESYVFGAESSRYLREVIHAIREVGTSLIICDMLVYCSFC
NYQFSENVLKLLMHQYMTAPSNELKPVFSILTELLLLEDPVQSQRIKIVIDGVTDGAGTS
YDGLLATVRLNHATDSRRSYTCIKFLVSLAGKSTPIKDYLMQIPSKWQWAVNWLKKKMSE
YYWTPSSTSATSNEDSNRKSFQRTHSAQSTLEEAKALLTELESQEGSPEMDTNEEEADNT
SSSKDQVDESSRKKT
NT seq
7608 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggaagaggagcacgtgcacacactgcttagtatggggttcccggagtccgaa
attaggcgggcccttcggagggccaagaacgacctgaatgaggctgtggcctacctgacg
aatgaccagacactgccaagtgactgggaggaggtggatgatgtagaaatgaaagacgtt
cactcgcggccgagccagacaatgtacagcccttcccctccccccagttacgatgaagtc
aatactatggaaaagactgatgaaaatggagaaaacggtaatacagaagaggaaaacccc
ttggaattccctgtcactaacctgtatgaacttgagggtcgtgtctttgcggaacattgg
tccattccctacaagaaagaagaatcactcgggaaatgtcttattgcagcaacaagacta
gccgaggctaatctaacggagactgatgaacactgtaggcggttccttgagagatgcatg
ccagactcatttcaaaagctgatgacttccggggcagttcacagatggaacacagaaata
caggaaggaatatttaatatggcagaattatttatagacatgtgtgttgctcgccttcag
catttacctatacaccacgagatccttaacattctcacactggtgttcaataaagaaagc
gaatttcactttaaaaaccgttccaagcgagaccgtacatattgggaagataagctagag
gatggtcaactgtatactgtgaatactggttacaagtcttccatagatccctatggatgg
ttaacacatcttatcaataggtttgctgtcaagggtggattcaatttagtgcgcaaatta
ctggaaaatgaagatttagatgctccttcaatggcagccctactaaggccttttgggatg
tgtgccgaattcttgaatcccaaagttgtgacggaaatcctggctccaggaatggagaag
acaatcaagtatatacagaacctggaggagagggacctcaaagaaaagaaaatcggcagt
gtgtctgacctgttggcctccatgaagctgctgtgtatacagatgtggcctcagcacaca
gattccctggacgacctcagactggaagtggcgctcagaatgctgaagtccccacatttc
aacgctcggatgaacgccttaaaagaggtgacaaagctgatagatgataccacccccaac
aaagtgtccaagacggcgatcgattacaagacaatactgcaatggctggtggagaacaaa
gtgttgtccatcgctctcgaaggtaatatagaccaggtgcaatattgtgaaaaggtcaag
ggcattgttgacttcctgggctctgaaatcaccctagaggaactggccatgatatggaaa
atgcaggtgggacagaccaatcatgtgatagataacattcactccatcatagcagctgca
gcggttaagtttgactcggcacaactggaacacttgtttctgttaatacagaagaaatgg
caagatgaccacaatcgtatgaaggagaagttattacgtctgattggtaaaatagggaga
gatgcaaaggaacccaaaacaactaccagggtgctggagctgctctgggacctctcccac
ctgccgaccctctcccggcagctaatcgagctggccctcgaggagcacctggccattctc
agcgactcgttcagtgtacgggaaccagtcaagagaaactacgtcattaagtgtgtggag
gatatcagaaagggtgcatgtgtactgccttccttaaaacaactgctttacatctgtaaa
aatataatgaagcaaaataaccataaatctgaaaagggtattttacatgaactgaacaaa
aaccatgacgtaattaagctggtgacgcagagcctgattaagctccacaaacaagccctg
gtcacagccggagacggacagctggggcccgacagcattgtagacaccagatacccacac
tccgagtttgtgtccacccacctgcagttcctgcagtacacgctacaggagggggccctg
tacctcccctggagccgggcccgggacatctgggggacgctgattgccaacacggacgcc
tgtacctgggacagagagacatgttttgagtggttcagtcgaggtttgcctgatctcgag
atggacacacaaactcagctgttccagaaagagctgctaaaactggatccagcaaaactc
acggacaaaggttttacctgctttaagaatttctttgagaatgtgaacaagtatgagcac
cgactgaagacagacggagggagactggttgttgagaaaagtgacctattaggattggac
tatatctgggaaatttgtctgaacacaccagatgaagccatcgcagacaaggccattcag
cttcttctctgtgtcagttacaccaacctcgcggtcagactcaaaagggataccgtgagc
ctccacaagaaattcatctccgagtgctccaatagattagaggctgctatgattgggatg
ggaggtaccgccatagctcaggccgttacctgggccaccaaaactcttacggcagccatc
gttaaagaagtggccaacgtgccgcctccctcaagatccattaagttgatgaatatcgag
cgtctgctgtggattgcggaggtttacgttctgaacgtggaggagaaccaccagacgacg
aggatcatcctcccccatggtgcctccttccacgggctacagatcaacctcatgatcacc
tgcgagtcccccaaacaggaattcatgctattgtgccatggaaatgagaccctggggtcg
gtccgagccaggatcgccaataaactgcggcagcccacagacaacgtacaggtcgtagct
caggacaaaatgctggatactcagaaggaccagaaactcctgcaccagctcgagttcgag
gacaaccagctgattcaagtacgcctgaccacgcccactctgcaacccctgggcaaagag
ccaatgacccccacgtccaaacagaactttgacctggagcaggaaaagatgttacctggc
gtcgtcatggcagtggagggacaggtgtttgacatgttgtatcagctggcagatctcgac
gaacccagaataactcacagggtgaggaaactactgatgctgattccgaccgatcctcag
atctccgagactctggagtgcattgcaaacaagggagtgaagcaggctgccgaggatgtc
agcccccgagccagtcccaggaagtccgcctccgcctcccctctccccagcccccgcctc
gcccccaaggacgtgctgaagtcactgtttgatgccagcgcccaggacatgtcagcattc
cgtgtgctctataatctggaggtgttgagcagtaagctgatgccgatcagtgtggacctc
gccacccggatcagtagccaggccttctgtgacgacttcctgtctgtggggggactacag
atggtggtcaatgtcctccaggccgagtcccttgccccagaggtcaactacaccatcagg
cagggctgttacgcaatctgcctacagctcgcccgcttcctgctgtgtgggcaaaccgtt
tccacggatatagacgatgctcacggaggcagcgaggagacaaagtctgcatctagctca
ctgctggcctcctcccctcaaaacacgtcctttgttaagcagtcggcgggcagtcatact
gtacagacaatggatgtgcacaccttcacagagaccgtgtcgtgtttcctgagggtgacg
tgggcggccgctgccgggaggctccacctcattgggacgtctcaggcggtgattgacagc
tcctcaggtcacggcaggcgaagcagacagagtagtacaggtagtactgccagtacgggg
agtgagagcgactgccagagtctgcacgcaggagtgtgcgccaaggcgcgggatatcccc
accacagactgtaacatagcgcgggaagccttggagatcctgatcacctgtctacagatc
cgatgtgaactcattgcctccttttattccctgccctgcacgagcgactttatcgtggat
attttggtgggttgtaccaatggtgacatcagaaatgcagccctggagcagttctttctg
ctgagtcagactgagtgctccgtgcagcatacgcctcatcactttatgctgcagctgctg
cttaaggcatatgttcccttctgggtgtcatcagcgctggccagaggagtcagccaaagg
ttgttaagtcagtgctctcagtactttgatctgctgtgtagacttcttgagggcctgtca
aaggaagaccaggggaagctgaagatgaacccgacctccatgttggaggatgaagtggcc
tggctggggaactacgtcccctctccccacccggacctgtctgacacagacaacagtctc
ctggccggtcatctgaaactcatcactacactcatcacctgtgaaggggtggatccggaa
gaaaatggaagaacattggtctatgacatcctccatgacttcctcttcccagcatccaaa
gtaatgatggacagcatgaatacgagcagcgaggaaaagctcgaggaagtcaacccaaaa
tgcagcaattgtgaatctcgtgtggcagcttacagactattaatagagttagccaagggg
aactactctatgttaaaagatgtatgtaaacagctgatagaaatgcaccatcttcctcag
cctgactgtgccaacgaatgggagtacctgccccctgtagacggtcgtgcccgctgtggg
tttgtggggctgaagaacgggggcgccacctgttacatgaattcggtcatacagcagctg
tacatggtgccgggaatcccggaggtggtgctgggaacagaggaggagagaccagacgag
gacagtgtatttttccaaatccagcaagtgttggggcatttacaggagagcaagttacaa
taccatgaacctgagcgtttctggaaggtgttcaagctctggggtcagactgtgaacatc
cgggagcagcaggacgccttcgacttcttccaggcgctgattgaccagatcgacgaacac
ctcaagaaaaatgggaaaacagaattatttaaaaggaagtttcaagggatattctcagat
cagaaaatttgcaaggattgccctcacaggtatgagagagaagaagcctttctggccttg
aacctgaccgtgaagaacgccacactacaggattccctggaccagtttgttaagggggag
ctactggagggggacaatgcttacttctgtgataaatgtggggaaaagaggaacaccatg
aagaggatgtgtatcaagacgctgcccccactactgtgcatccagctgaagaggttcggc
tacgactgggaggcgaatcgggcgctcaagttcgacgactacttcaagtttccctgggta
ttggacatggagccctacaccactgacggaatggcccggcgggaagaagtgttggagacc
gtggacagcagctccgagtcggactccggggaatcgaccaatcaggaggagcgggtcctg
gagattgtgacatcgggaaacaacacggaacaccgacagatcaattacgagttggtcggg
attgtggttcacagtggacaggccaacgcaggacactactactccttcatcaaggaccgc
agaggtgacatgatgtcaaatgctcagaaagggaagtggtttaagttcaatgacactgtg
gtggaggagtttgagatgacggaggacaatctggaggcggagtgtttcggaggcacttat
aaagccaagatcatagaacccactacgacgttgccagatgaaagagtacgctactggaac
ggctacatgttgttttacgagaagatggaagagcctgctaagaccccagtgtcagctaaa
aaatccaaaatacagacccggaaagcggttctggagggagggaaaggggatttggactcc
aacagtttcatggagttgacggagttagtgcataagggagagaagaaggggatctttatg
gacgagatgccggcgagcattcaccagatcatccaggcggagaacctgacgtttgtcaag
aaccgcgatgtctacaacaccgactacttcagattcatcagggacctggtcgctgtcaac
atgagtaaggagagccacaaggaattccaacagatgtcggtcactgcgctacagctgggc
gttcgattcctgttcaacaccttcttcaggtgtaaaaagaaaacaaagcctcttttggat
gagtgggtggagctgattgatgagatcctggataagagtaaagaggcgtgtaattggttg
gtggagtatctcagtagttccgagggatcgtcgtatatcaaaccgttcctcctggagtgt
ccatgtcgagatgttcggtacaccatggctcgcttactggagcgactcatgtcctctcac
ttcaggcatggaggagtcccgacacaaaaatgcttcaatgagattgtggagatcattctc
tatatgctgaacaaagacgtagtggaccattgtaagaactccttccattacttccaagtc
atcaagtcgtatgtccaactgggtaccaaatcatgcagtcatatgtttttacgacaaggt
tttcaacgccttatttggtttttaatcggaaattcaggggagacaaatcaggggcatgac
attccctccagaaggtggagctctattcagtcccgcgagttcggcaacctccactcctcc
ttagcaatactcatcttaaattgtgacgtatccaaatacagaacagatgatcccggtgaa
ttcgaaatacgcaaacctaaaactgtatttcccatgaaatttctcttcatgccacaggat
atggagagttatgtctttggagcagaatcctctcgttacttgcgtgaggtgatacacgcc
attagggaggtgggaaccagtctaatcatctgtgacatgttggtgtactgcagtttctgt
aactaccagtttagtgagaatgtcctaaaacttctgatgcaccagtacatgacagcgccc
tccaatgaacttaagccagtcttctccatactgaccgagctactgctgcttgaggatcct
gttcagtcgcagcgcattaagatcgtgattgatggagtgactgatggtgccggtacctcg
tatgacggacttctggccacagttaggctgaaccatgccacggacagtagacgatcgtac
acttgtatcaagttcctggtcagcctagcggggaagagtacaccgatcaaagactacctg
atgcagatcccctccaagtggcaatgggcggtcaactggctcaagaaaaagatgtcggag
tactactggacaccctcatccacctcagccacgtccaatgaagactccaaccgcaagtcc
ttccaaaggactcacagtgcacagtcgactctggaggaagcgaaagccttgctgacagaa
ctggagtcccaggagggcagccccgagatggacacgaacgaagaggaggctgacaacact
tcctcctccaaagaccaagtggacgagtccagcaggaagaagacgtga
DBGET
integrated database retrieval system
