Crassostrea virginica (eastern oyster): 111119590
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Entry
111119590 CDS
T09197
Name
(RefSeq) syntaxin-like
KO
K04560
syntaxin 1A
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
111119590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvn04131
]
111119590
Membrane trafficking [BR:
cvn04131
]
SNARE
Syntaxin (Qa)
Stx-PM
111119590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
ETRAMP
SYNE3
DUF2207_C
Herpes_US9
DUF7310
RIFIN
PAS_7
HH_RND_rel
DUF8180
DUF6548
Exonuc_VII_L
DUF745
Motif
Other DBs
NCBI-GeneID:
111119590
NCBI-ProteinID:
XP_022315612
UniProt:
A0A8B8CIF7
LinkDB
All DBs
Position
2:58021174..58022875
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AA seq
310 aa
AA seq
DB search
MTVRDRLPEFEAKRDQYERESMRGKKGKKSKKEEEDDLSLPGFLEKVKVVEGKLALLKAD
VSELKKQQNTLYCAPQVSDADFQKMETLAERIMSSSIGIRKDIELLSSAGSDPKSQKKGL
ILSNAEQRVQSMQIDRLSHELRTVMNDFRGSQASYLERTKARLNKQRQIVGDPQYDVNTN
SVNLDLNVQNPRMFVDSYFEESERAVSELQDLQEREKELNDLESQIHEVNMLFKEMHGLV
QDQGKMVDNIEKHVEQAVNEVQSGNEQLLEAKKSQCAARRKKIICFSILITVIVIAVVII
VIFMVTNNSE
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgacggtgagagaccgcttaccggagtttgaggccaagagggaccagtatgaacgggag
agcatgcggggaaagaagggcaagaaatccaagaaggaggaggaggatgacctgtccttg
ccgggcttcctggagaaggtcaaggtcgtggaggggaagctggccctcctcaaggccgac
gtcagtgaactgaagaaacagcagaacaccttgtactgtgccccgcaagtgtccgacgcg
gacttccagaaaatggagaccttggcggagagaatcatgtccagttccatcggaatcagg
aaggacatagaactgttgtcatctgctggatccgaccccaagtcccagaaaaagggactg
attctgtcaaatgcggagcagagggtccagagcatgcagatcgaccgcctctctcacgaa
ctcagaaccgtcatgaacgacttcagaggcagtcaggccagctatctggagaggacaaag
gccaggctgaataagcagcgacagatcgtgggcgacccccagtacgatgtcaacacaaac
tctgtgaacctcgaccttaacgttcagaaccccagaatgtttgtagacagttatttcgag
gagtcggaaagagcagtctcagaactgcaagatcttcaggagagagagaaagaactgaat
gatctcgagagtcagatacatgaggtcaacatgttgtttaaggaaatgcacggcctcgtt
caggaccaagggaagatggtagataatatcgagaaacatgtcgagcaagcggtgaacgag
gttcagagtgggaatgaacagctgctggaagctaagaagagtcagtgtgctgcgcgcagg
aaaaaaataatctgtttctccatccttatcactgtcattgtcattgctgttgtcatcatc
gtcatattcatggtaacaaacaactcggagtga
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integrated database retrieval system
