Crassostrea virginica (eastern oyster): 111119660
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Entry
111119660 CDS
T09197
Name
(RefSeq) LOW QUALITY PROTEIN: nephrocystin-4-like
KO
K16478
nephrocystin-4
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cvn03037
]
111119660
Cilium and associated proteins [BR:
cvn03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
111119660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ASH
Motif
Other DBs
NCBI-GeneID:
111119660
NCBI-ProteinID:
XP_022315775
UniProt:
A0A8B8CJ52
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Position
2:41975694..41981597
Genome browser
AA seq
1439 aa
AA seq
DB search
MAAFSSGQKWKEFFAKTTQLPPAFEREHSAPDVSTPLRISINTIEGLIGKSEAEKQPDYQ
VFVSLYDLSYRQFFGKQWVGPLLAPQGGGAKRPKLKYNQNLYFHTSIHNANIVAVVEVVA
VTQAGPFNQKRVSCGWGIIRVFNEEKKSQEASAQGNVLPAQKVKLNYGTPRAIFFMDDPV
EENELLKPIPDCTLSFTVTKHKPMYAVLSLIPENMLVGGHDIIPGLVGGENQNVDALKKP
KSLNRMPIQINNLRIQLPPTIEKFEEELCEALHRDREGMENKKLPGISISIQERRLIVGV
HNGLNYLEKPETMYLDVYDEATKSLKPQSSPNLRRSKRFHTSQRSLNSTDSAATCLVVKN
KIELNEVIDDPMCAVLFTLEYVVGHKISEEEKKLSQSISKAHTQNVFVRWGVWHPITQTN
SHAVQVSFHGGPIKFPDESFLFKMPNTKMQNSEASKFAGGTITLQWERGDGLAGEPLPLS
HLIQPGSMTSMRSDADDNVLMDSPTGRKPPTGKRGPGHQVPQQSMIQPEMAASVYAGMMQ
QQMQPPMMPPGYPYMPMQQPMYGFGQSYQKSPRSTVRVSTEMQEIPCQPFHAPIMALPPQ
PNRQQGLSRAAYAKLYSTDFPAIVDANGXPPEVIDVQKPWEVNLHREIQDPLQCNEIVFQ
FLAFDRPSAIETSATEYGNTVFFTFQFYRLPHVTTERVMLCKPKNELVSDHTSMPFIIHR
LEKDHPGAAGLQIKYMMDPTYMKPGEXQMFLQHLTQQILYIDIWDGESLFLIGQCAVDLK
FLCRNGHEAVQSTFELDVMKTEYEEASSKVMGNDTXGTVSRIQNLANGKLHFRMANVGYL
VDHKVQIETPISVLNKSHVVISQTAGNISYPGGSLEDGSSTKKTGLTSKKKVVRAHHIAE
KNRELAQLLSTHNDQMIPEKDETPQEQDSEKRRKLARMEALRQKQGIDNKFNTVLAFKTE
KQERMKDYKTLEIYRLQTKKDGIMNMLSQSISTEHTINPSFGTPEFFEFVLKNPFNIKQT
ITIEHEDADLKVITDAREWRFFKQLNGVTTXVEEDMFNKEATSQYPQVFLRPKETVQIPF
KYLTFLTDNSVQNGPLDSDKALKDDTRRKTMQPLQTRFVRVLFKGEDEKAISILQLKIEP
QPHVVXQTLRFYHPEQTFFKKSIRIPGSQNLSGPPGGPGTVQFFVRCSDSNVIAECKPTQ
SGDPVDVFIKAALAASPQIKHFFVCIYSDPFLSHPVQVWQLYIHALQKVDVSCVEGQTSR
FNLLLRGTQAARLVRSFSSNPREMQLFPSEQFLLASGAVHELSVAVRPMKEGTKQFHLNX
VDVECHQLIRTWLICVTCQPPTISRAFELQLPVGGGKGSNKKIXYTNPYPHRREYHVLSS
REDLIQFRENHFIVEGGETYTIGLKFIPIMKPGVAEILVFINDEDDKNEETFKITATYR
NT seq
4320 nt
NT seq
+upstream
nt +downstream
nt
atggcagcctttagttctggacagaaatggaaggaattttttgctaaaacaacacaactg
ccaccagcatttgaaagggaacattcagcaccagatgtgtcaacacctctacgcatttca
atcaacactatagaaggacttattggtaaatcggaagcggaaaagcagcctgattatcag
gtttttgtcagtctgtatgatttatcttacagacagttttttggaaaacaatgggtggga
cctctattagcaccacaaggagggggtgcaaagagaccaaagctgaaatataatcagaat
ctttattttcacacatcaatccacaatgccaacattgttgcagttgttgaagttgtagct
gtgacacaagcagggccttttaatcaaaaacgagtttcttgtgggtggggcatcataaga
gtcttcaatgaagaaaaaaagagtcaagaagcttctgctcaaggaaatgttttgccagcc
caaaaggtcaagcttaattatggaaccccaagagctatatttttcatggatgatccagtg
gaggaaaatgagcttttgaagccaattcctgattgtactttgtcatttactgtgacaaaa
cataaaccaatgtatgcagttttgtctcttataccagaaaacatgcttgttggaggacat
gacatcatcccaggcctggtagggggtgaaaatcaaaatgttgacgccctgaaaaaaccc
aaatccctgaatcgtatgcccattcagataaataatcttcgcatccagctccctcctact
attgaaaaatttgaagaggagctctgtgaagcactgcacagggacagagagggcatggaa
aataagaagctaccagggatatctattagtattcaggaaaggagacttatagtaggagta
cataatggtcttaattatcttgagaagccagaaaccatgtatttggatgtctatgatgaa
gccacaaaatctctaaaaccacagagcagtccaaatctcagaagaagcaaaagatttcac
acttcccagagatctctgaatagcactgatagtgcagcaacctgcctggttgtcaaaaac
aagatagaactgaatgaggtgatagatgatccaatgtgtgctgttctttttactttggaa
tatgttgttggacataaaatatcagaagaagagaagaagttgtcccagagtatcagtaaa
gcacacacccaaaatgtttttgtgagatggggagtgtggcatcctatcacacaaacaaac
agccatgcagtacaggtttctttccatggaggacctatcaaattcccagatgagagcttc
ctgttcaagatgcccaataccaaaatgcaaaattcagaagcaagtaaatttgctggtgga
acgataacattgcagtgggagaggggggatggtctggctggggagcccctcccactgtct
catttaatacaaccaggttctatgacttctatgcggagtgatgctgatgacaatgttcta
atggatagccccactggcaggaaacctcccactggtaaacgtggccctggtcatcaagtg
cctcagcagtcaatgatacagccagaaatggcagcctccgtttacgcaggcatgatgcaa
caacaaatgcagccacccatgatgcctcctggctatccatacatgcctatgcagcagccc
atgtatgggtttggtcagtcctatcagaagtcccccagaagcactgtgagagtcagcaca
gagatgcaggaaattccctgccaacctttccatgctcctataatggctctccctccacag
ccaaacagacagcaaggactgtctagagcagcgtacgccaagctgtactcaacagacttc
ccagccatcgttgatgccaatgggnaaccaccagaagtcatcgatgtgcagaaaccttgg
gaagtgaatctacatagagaaattcaagaccctcttcaatgcaatgaaattgttttccag
ttccttgcttttgaccgtccatcagctattgagacatcagcaacagaatatggaaacact
gttttcttcactttccagttctacaggctacctcatgtaacaacagagagagtcatgctg
tgtaaacccaaaaatgagcttgtgtcagatcatacctccatgccattcattattcacaga
ctggagaaggaccacccaggggctgcaggtctgcagatcaagtatatgatggaccctaca
tacatgaaacctggggaantgcagatgttccttcaacatcttacccaacaaatattgtac
attgacatttgggatggagagtccttgttcctgattgggcagtgtgctgttgatcttaag
tttttatgcagaaatgggcatgaagctgtccagtcaacatttgaacttgatgtaatgaag
actgagtatgaggaagcatcaagcaaggtcatgggcaatgacacanttggcacagtatcc
aggatacaaaacttggctaatggaaaacttcactttaggatggctaatgttgggtatttg
gtagatcacaaggtacagattgaaacacctatatctgtcctgaacaagagccatgtggtc
atttctcagactgctggtaatatttcttaccctggtggaagtttggaggatgggtcttcg
accaaaaagacaggcttaacgtccaagaagaaggtggttcgagctcatcatattgcagag
aaaaacagagaacttgcccagcttctatcaactcacaatgatcaaatgataccagaaaaa
gatgagactccacaggagcaagattcagaaaaaagaaggaaactagctcgcatggaggca
cttagacagaaacagggcatagacaacaaattcaatacagttttggcatttaaaaccgaa
aaacaggaacggatgaaggattacaaaactctagagatttaccgtcttcaaaccaaaaaa
gatggcattatgaatatgcttagtcagtccatctccacagaacacaccatcaacccgtcc
tttggaacgccggaattctttgaatttgttcttaaaaacccatttaacataaaacagacc
attacaatagagcatgaagatgctgatttaaaggttattacagatgcaagggagtggcgc
ttttttaagcagctgaatggggtaacaaccnaggtagaagaagacatgttcaacaaagaa
gccacctctcagtatccccaggtctttctccgtccaaaggaaactgttcaaattcctttc
aaatatctcacctttcttacggataattcagtgcaaaacggtcccctggattctgataag
gctttaaaagatgacacgaggagaaaaacaatgcagccactgcagaccaggtttgtcaga
gtgctcttcaaaggagaagacgagaaagctatctcaattcttcagctcaaaattgaaccc
cagccacatgttgtanatcagactctgagattttaccatccagaacagacattcttcaag
aaatctattcgaattcctggatcacaaaacttgtctgggccgcctggtggacctggaact
gtgcagttctttgtgagatgcagtgatagtaatgtcattgcagaatgtaagcccacacag
agtggagatccggtggatgtgtttatcaaagctgcattggctgcttctccacagatcaaa
catttctttgtttgcatctactcagatccctttcttagtcatccagttcaagtttggcag
ctgtacattcatgccttgcagaaagttgatgtgtcctgtgtcgaaggccagaccagcagg
tttaatttgctgctaagaggtacgcaagcagcccgtctggtacgcagtttctcgtccaat
ccacgagaaatgcagcttttcccctcagagcagtttttactggcctctggtgctgttcat
gagctgagtgttgctgttcgcccgatgaaagagggaacgaagcagtttcatttgaatngt
gtggatgtggaatgtcatcagttgattcgaacttggctgatctgtgtcacatgccagccc
ccaaccatatcacgggcatttgagctacagcttccagttggtgggggaaaaggaagcaac
aagaagatanactacaccaatccttatccacaccggcgagaatatcatgttctgtccagt
agagaagatctgatccaatttagggagaaccattttatcgtagaaggaggggagacttat
acaattggtttgaagttcattccaataatgaaaccaggagtggcagaaatattggtattt
attaacgatgaggatgataaaaatgaagaaacttttaaaattactgctacatacagatag
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