Crassostrea virginica (eastern oyster): 111119682
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Entry
111119682 CDS
T09197
Name
(RefSeq) pumilio homolog 3-like
KO
K14844
pumilio homology domain family member 6
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvn03019
]
111119682
03009 Ribosome biogenesis [BR:
cvn03009
]
111119682
Messenger RNA biogenesis [BR:
cvn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
111119682
Ribosome biogenesis [BR:
cvn03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
111119682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPL
PUF
Motif
Other DBs
NCBI-GeneID:
111119682
NCBI-ProteinID:
XP_022315805
UniProt:
A0A8B8CN46
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Position
2:complement(8604927..8612988)
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AA seq
802 aa
AA seq
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MKYKMEDSSFEEDTTRTRRRPPRSKNKKHTSMRGNPEGDSLYQKQPTKIVAPPNTDNEDS
FEVHSPRKRAKKVERDAELVDKRQMVRKKKSMYSDTDLSSLDVTDTPDTLSQISAIAPVS
DVSMMTTFRNPRGRHDMTWEKAVQKARGQPDGAERSFSRKKSSKVMMFNRPEVIREVAEG
VESDKSVENIPAVANIPEEEPQPLERRKSIKVKIKRAASNAAGKLKTLKTKKQLNESRTT
LGVKKRKIDESQMEEKSESKKTKLKELPFKERKKVRKMLKNNYEAIQRSKKIWEDLRRQD
IAESKKISLCNELLDMVKGNMKEFAFAHDTARVLQCLIQYGSPEQKDSVYQEVKDQIVLM
SKSKYAKFLVKKFLVYGSKPMKNAVIKSFHSNVRKLVRHAEASEVVELAYNDYANAAQRL
SLLEEFYGPSFTLFKTPDIKSLDQLLLIQPDKKEMILSNMKEALLPLIDKTILGHSMVHK
IFHEFFTHAKDKMRSDMVESVREHLVPMIHTRDGARTAMYCLWHGTSKDRKIIMKSFKTH
VPKICKDEYGYLVLVALFDTVDDTKLVGKIILEEIFKSLHDIAQNQHGRKVLQYLLCPRD
PHFFQPDLVRFLREGDNNPHSKKDTALRYKELLTMVSPPLLQYIVEHARELVLENASLLL
ILSILNYSLGDPTDAMRAVAEIAAEPFVAGSLENQHIVEHPAGHMTLKHLIQRDRDRIQA
GQPVLFSQVLLRTLKDGSLKSWAACNRGCFTLLFLLEVDHPEITDTVISQLAGLRSSLKK
MTFRGAQILLQKLDALSGEYKL
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacaaaatggaggattcttcatttgaagaggatacaactagaacgcggaggaga
cctccccggagtaaaaacaagaaacatacgagtatgaggggtaacccagagggcgacagt
ctgtatcagaaacagcccaccaaaatcgttgccccaccaaacactgacaatgaagattct
tttgaagtccactcacctagaaaacgtgctaaaaaagttgagcgcgatgctgaattagta
gacaaaagacaaatggttaggaagaagaaatctatgtatagtgatacagacttgtcctca
ttggacgtaacagacactcctgatacattgagtcaaatcagtgccattgctcccgtgtca
gatgtatctatgatgacaacatttagaaatccccgaggtcgacatgacatgacatgggag
aaggcagtacagaaagccagggggcagccagatggtgctgagaggtcattcagcaggaaa
aagagtagtaaggtcatgatgttcaaccgaccagaagtgatccgagaggtggcagaggga
gtagaatcggacaagtctgttgagaacattccggcggtggccaacataccagaggaggag
cctcagccgctagagaggaggaagtccatcaaggtaaaaataaagagagcggcaagcaat
gcagctggcaaactgaagacactgaagaccaagaaacagctaaatgaaagtcgaacaacg
ctaggtgtcaaaaagcgaaaaatcgatgaatcccagatggaggaaaagtcagaatccaaa
aagacaaagttaaaagaattgccattcaaagaaaggaaaaaagtgaggaaaatgttgaaa
aataattatgaagccattcaaaggtctaagaaaatctgggaggatcttagaagacaagat
attgcagagagcaagaagatttctttgtgtaatgaactgttggatatggtcaagggtaat
atgaaagagtttgcctttgctcatgacacagccagggttttacaatgtttgatccagtac
ggatccccagaacaaaaggactcggtgtatcaggaagtcaaagatcagattgttttaatg
tcaaagtcaaagtatgccaagtttctggtgaagaaattccttgtttatgggtcaaaacca
atgaaaaatgcagttataaaaagttttcattcaaatgtgaggaagttggttagacatgct
gaagcctctgaagtggtagagctggcctacaatgactacgctaacgcggctcaaaggctg
tcccttttggaggagttttatggaccaagttttacactttttaagacaccagatatcaaa
tccttagaccagctgttgctgattcagcccgataagaaagagatgatcctgagcaacatg
aaagaggccctgctgccactcattgacaaaacaatactaggacattcaatggtccacaag
atcttccatgaatttttcactcatgcaaaagataagatgagatcagatatggtggagtct
gtgagagagcatttagtccccatgatccacacaagggacggtgccaggacagccatgtat
tgcctgtggcatgggaccagcaaggacagaaagatcatcatgaagagctttaagacacat
gttcccaagatttgtaaggatgagtatggatacctggtgctggttgctctgtttgacaca
gtggatgatacgaagctggtgggcaaaatcatcctagaggaaatctttaagtccctgcat
gacattgcccagaaccagcatggtaggaaggttctccagtatctgctgtgccccagagat
ccccatttcttccaacctgaccttgtccgattcctgagagagggagacaacaacccccac
agtaagaaggacacagctctccgttacaaggagttgttgacaatggtgtcaccgcctctg
ctgcagtacatagtggaacatgccagggaattagtgctggaaaatgcctcgttgctcttg
attctttccattctgaactattcacttggtgatcccactgatgctatgagggcagtggct
gagatagcggcagaaccgtttgtggcaggcagcttggaaaaccagcacatcgtggagcac
ccagctggtcacatgaccctaaaacacctgatacagcgggacagggacaggattcaggcc
gggcagcctgtgctgttctcccaagttttgctgagaacactaaaggacggatctctcaag
tcctgggcagcttgtaacagaggatgttttactctcttatttctgttggaggtggaccat
ccagagataacagatacagtcattagtcagctagctggactccgaagttcattgaagaaa
atgacatttagaggagctcagattctcttacagaaactggatgcattgagtggagaatat
aaattatga
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