Crassostrea virginica (eastern oyster): 111119756
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Entry
111119756 CDS
T09197
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31-like
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111119756
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvn03041
]
111119756
Spliceosome [BR:
cvn03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
111119756
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
111119756
NCBI-ProteinID:
XP_022315925
UniProt:
A0A8B8CJP7
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Position
2:55690730..55699823
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AA seq
492 aa
AA seq
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MSLADELLADFEDDDVEQNVEEEAMEDIAEVDEVVPEVDYSSKESVKHIAKLRDGPDLAR
IMTEIKKYAGQPRREKVAGPVEADPEYQLIVEANNITVEIDNEINVIHKFTRDHYSKRFP
ELESLVHTPLEYIRTVQELGNNILENSKSNEVLQEILTPATIMVVSVTASTTQGSELTPE
ELAVVNEACKMAVDLTECKAKIFEYVESRMSFIAPNLSIIVGASIAAKLMGIAGGLTNLS
KMPACNVQILGSQKKTLSGFSTAAILPHTGHVYYSEIAQKTPPDLRKKAARLIAAKCTLA
ARVDSFHESVDGAIGDSLRAEIEQKLDKLQEPPPVKTVKPLPAPIEQSRKKRGGRRARKM
KERLGLTEVRKAANRMNFGEIEEDAYQDDLGFSLGALGKSQSGKIRGPVVDSKTKARISK
QLQAKVQKQNNVWGGSTTVKRQIAGTASSVAFTPLQGLEIVNPQAAERKVQAANAKYFSS
TAGFHKLKKEDT
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttggctgatgaactgttggcagattttgaggatgatgatgtcgagcagaatgtg
gaagaagaggcaatggaagacattgcagaggtggatgaggttgttccagaggtggattac
tccagcaaagaatcggtgaaacatattgctaagctgagggatggaccggatctagcccgc
atcatgacggaaatcaagaaatatgcaggacaaccacgcagagagaaagtggcagggccc
gtggaagctgacccggagtatcagctgattgtagaggcaaacaacatcacggtggaaata
gacaacgaaatcaacgtgattcataagtttaccagggaccactactccaagagatttcct
gaattggagtcccttgtccatactccactagagtatatcaggactgtgcaggaacttggt
aacaatattttggaaaactcaaagagcaacgaagtgttacaggagattctgaccccagcc
acgataatggtggtcagtgtgacagcatcgacaactcaggggtcggagcttactcctgag
gaactggctgttgtgaatgaagcctgcaagatggcagtagatctgacggaatgcaaggct
aagatctttgagtatgtggagtcgcgaatgtccttcattgctccaaacctgtcgatcatc
gtgggggcgtccattgctgccaaactaatgggaatcgcaggagggctgaccaatttgtcc
aagatgccggcctgcaatgtccagattcttggctcccagaagaagacgctgtcggggttt
tccacagctgccattctcccccatacaggacacgtttattacagtgaaatcgcccagaag
acacctcctgatcttcggaagaaggcagcgagactgatagctgccaagtgcaccctggca
gctcgtgtggacagtttccacgagagtgtggatggagcgataggggacagcctgagggcc
gagatcgagcagaaactggacaaactacaggaaccacccccagtcaaaacagtcaagccg
ctccccgcccccatagaacagtccaggaaaaagcgtggaggtcgaagagccagaaagatg
aaggagcgattaggattaacagaagttagaaaggcagccaacagaatgaactttggagag
attgaggaagatgcctaccaggatgaccttggattttctttgggtgctctcggcaaatca
cagtccgggaaaatccggggtccagtggtggactccaagaccaaggctaggatatctaaa
caactgcaggcgaaggttcaaaagcagaacaatgtatggggaggtagtaccacagtcaag
agacaaattgctggaacagcctccagtgtggcattcacaccattacagggtctggagatc
gtgaacccgcaggcggccgagaggaaggttcaggccgctaacgccaagtacttttccagc
accgccggcttccacaaactcaagaaggaggacacgtga
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