Crassostrea virginica (eastern oyster): 111119828
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Entry
111119828 CDS
T09197
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 4-like
KO
K22991
WD repeat-containing protein 45
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
111119828
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvn04131
]
111119828
Membrane trafficking [BR:
cvn04131
]
Autophagy
Other autophagy associated proteins
Others
111119828
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
WDR55
WD40_Prp19
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_IFT80_2nd
BCAS3_WD40
ANAPC4_WD40
Beta-prop_IFT140_1st
EIF3I
Utp8_b_propeller
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
ERbeta_N
Motif
Other DBs
NCBI-GeneID:
111119828
NCBI-ProteinID:
XP_022316051
UniProt:
A0A8B8CNS9
LinkDB
All DBs
Position
2:complement(8777361..8783278)
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AA seq
338 aa
AA seq
DB search
MSRGVISLRFNQDHGCFTCATETGLKIYNVEPLTQKLSLGQDVVGSIVCAEMLFRSNIVA
MVGGGSSPKYDEKAALIWDDTAKKVVMDVSFNQPVVSIKLKYDRLIVVLRNQIHVFSFPN
NPTLLHSFETRDNPKGLCDVSPFGQVIVFPGRKCGSVQVADLETTQPGQSSSPVMISAHQ
GELAYITLNQQGTLLATASKKGTLIRVFDTTTKKLVVELRRGADPATLYCITFSHDSSFL
CASSDKGTIHIFAVKDTSLNRRSTFKTMGFLGTYVESQWGLASFTVAAECACICAFGPGH
SVIAVCVDGTFHKYVFTTDGNCNREAYDVYLDIGDDFE
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagaggtgtcatttcccttagattcaaccaggatcatggttgttttacatgtgca
acagaaacaggactcaagatttataatgttgagccattaacccaaaaactttcattaggc
caagatgtggtaggcagtatagtatgtgcagaaatgttgtttcgttccaacattgttgcc
atggtgggaggagggtcatccccaaaatatgatgagaaagctgctttgatttgggacgat
acagcaaaaaaggtagtcatggatgtttctttcaatcagccagtggtgtcaataaaactg
aagtacgacagattgattgttgtcttgaggaatcaaatccacgtgttcagcttcccaaat
aatcccaccttgctgcattcatttgaaaccagagataatccaaaaggattatgtgatgtt
agtccattcggtcaggtgatcgtttttccaggacgaaaatgtggcagtgtacaggttgcg
gatctagaaaccacccagccagggcagtcgtcctctcctgtcatgatcagtgctcaccag
ggggagttagcttacattacactaaatcaacagggtacattgttagctactgcatcaaag
aaggggacactgattcgagtttttgacacaacaacaaagaagcttgtggtcgagttgagg
aggggtgcagaccctgctactctgtactgcatcaccttcagccatgattcttcatttctg
tgtgcctccagtgataaaggaacaatacatatctttgcagtgaaggacacaagtttgaac
aggagatctacgtttaaaacaatgggatttctgggaacatatgtagagtcacagtgggga
ttggctagcttcacggtggctgcggagtgcgcatgtatttgcgcctttggaccagggcat
tcagtgatagctgtttgtgttgatgggaccttccacaagtatgtgttcacgactgatgga
aactgcaatagggaggcctacgatgtatacctggacatcggggatgactttgaatga
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