Crassostrea virginica (eastern oyster): 111119830
Help
Entry
111119830 CDS
T09197
Name
(RefSeq) ATP-binding cassette sub-family A member 3-like
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
111119830
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cvn02000
]
111119830
Transporters [BR:
cvn02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
111119830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_15
CYSTM
AAA_23
AAA_22
MukB
Motif
Other DBs
NCBI-GeneID:
111119830
NCBI-ProteinID:
XP_022316055
UniProt:
A0A8B8CJX5
LinkDB
All DBs
Position
2:complement(11766294..11779366)
Genome browser
AA seq
1747 aa
AA seq
DB search
MGQANKFLLLLWKNYLIQRRKIFTTLLEIALPTFFGLILVLIRLRVTGEQVPNGMNWSAC
SDLYSMPRSYSYPKKIAFTPDNPLTRSVMAKVNKSMKYFTDVQAFESEDEMVSFLIFANK
TVNNTAHYLGGIVFDINTKDSQFGDQISYKIRLSSFPRHGRGTGNLNPAKQDKEWFTEFM
FPLYQVLGPRDNSSKCGSVPGYYKEGFLALQTNINRAIYESVIGNDTTGNQRLSELEDNI
QLKRHPYPPYNDDKFVLVIQQQFPLILILSFVLVALNVVKDVVHEKERKLKESMKMMGLN
SWLHWAAWFTKYFIFLLITSAIMTLFLTMNTNEGRVIGKTNPFIIFLFLLCFSMATIAFC
FLVSSFFSKANSGAAAGGILFFLSYIPYLFLQQRYATLSWGAKIASSLVSNIAMSYGGQV
IGMFEGTGAGIQWSTIDKGASVDDDFAMLHIMVMLLVDTVLYMMLTVYIEGVFPGEYGTP
LKWYFPLTKSYWCGTTATDDVPDDKRISIGQNPSFFETDPVGIRAGIQIRNLRRVFGKKE
NSKVAVAGMSLDLYEGQITALLGHNGAGKTTTMSMLTGFLPPSSGTAIVNGYDIREDIGN
VRSSLGLCPQHDVLFDTMTVEEHLTFFAKLKGCPSNKVEQEVEDMLVAINLTNKRKAASK
TLSGGMKRKLSVGIALIAGSKVVILDEPSSGLDPDARRQIWTVLQKNRAGRTMLLTTHFM
DEADLLGDRIAIMADGILKCCGSSLFLKNKYGAGYHMILVKEPKCNVEQVLATVKKYVKN
AEQESNIGAELSFRLPHDSTATFPALFDDLDSNKQKYGVSSYGVSVTTMEEVFIRVGEGT
DKSLNGIPGHHRNNVHENIDLDLTINGGHSDFDFAADGEHNKNTTLQGQQFYGMFVKRAL
HTARNKLVSATQVLIPLFYTIMALIVVKTFPGPHDSQALILTVEKYGENTIAFSDNGYVN
QSLIGQFYANQFQSSKDHVTYINSVEGYTKNPNLNDYLFQKGINNPGLYNLEYAVGADFT
RHQNSVVATGYFNNQGYHAPAISLATLANAVLQYITNSSKFTLTTVNHPLPRTEEQKIRE
ETQGSTTGFTIAFNFVFGMAFLSSSFVLFLIKERATKAKHIQFVSGVQPLTFWASTFCWD
LINYMIPCCILLFVLWAFGIEAYYISGHSAHILLLLFLHGWAMLPFMYLLSFIFNVPSSG
FVWLTMFNILAGDATVLAVGILGIPQLGLKDLANVLEWIFLVFLPNFCLGQGLMDYYSNW
EFLDSCQEYKQFCTLFPNPCCGPINGQCGELGCVYYNDNYLGWEKNGIGRMLVFLFVQGL
MYFTVLLFVESNLFKSIIYYLKSGKVEENGRPHSSSETTPLLQGERHLLAKQPRHYQISQ
VQEDSDVAAERERLAKSHFLTDSLILQGVTKYYGEYLAVNHISVGIPQGECFGLLGINGA
GKTTTFKTLTGDEIMTSGEALLNGHSVKSELAMVRQNLGYCPQYDALIDQMTGRETLFMF
ARLRGVQEQRIPGIVEGLMAALLFEEHADKLVKAYSGGNKRKLSTAVALVGNPKVVFLDE
PTTGMDPVARRYLWNALIKVRDTGRTLVLTTHSMEECEALCTRLAIMVNGEFRCLGSTQH
LKDKFGQGYTLLARIAFTETGEAPDIQPFMNFVQQKFPGSELKDMHQGTVTYHIARNSDV
SLGGIFGILESAKSEFHIEDYSVSQTTLEQVFINFARSQIPPREVNHGCCNGCCSCLCCC
RTHTHDE
NT seq
5244 nt
NT seq
+upstream
nt +downstream
nt
atggggcaagcaaacaaattcctcctgctgctgtggaagaattacctcatccagaggagg
aagatcttcaccaccctcctggagatcgccctgcccactttttttggtttgatcttggtt
ctgattcggctgagagtcacaggagaacaggttcctaatgggatgaactggtctgcttgc
tcagacctgtacagcatgccccgatcttactcctatcccaaaaagattgcctttactcca
gacaatcctctaactcggtcagtaatggcaaaagtcaataaatctatgaagtacttcaca
gatgtccaagcatttgaatcagaagatgaaatggtcagttttctgatctttgccaataaa
acagttaacaacactgctcactatttgggtggaattgtctttgacatcaacaccaaagac
agccagtttggagaccagatttcctacaaaattcgcctgagttcatttcctcgtcatggt
cgtggaactgggaacctgaatccagccaagcaggacaaggaatggttcaccgagttcatg
tttccgctctatcaggttctaggccccagagacaacagctccaaatgtggctctgttcca
ggttactataaggaagggtttttggccctacagaccaatatcaacagagccatctatgag
tcggtgattgggaacgacaccacaggaaatcagcggttgtcagagttagaggataacatt
cagttgaagcgacacccctacccaccctacaacgatgacaaatttgtccttgttattcaa
caacagtttcctcttatcctgatcttgagctttgtgttggtggctctaaatgttgttaag
gatgtagttcatgaaaaagaaagaaaactaaaggagtccatgaagatgatgggattaaat
agctggctgcattgggcggcttggttcaccaagtacttcatattcttgttgatcacatca
gccatcatgacattgttcctgacaatgaataccaacgaggggcgtgtcattgggaagacc
aatcccttcattattttcctgtttttgttgtgtttctccatggcaaccattgccttctgc
ttccttgtcagttctttcttttcaaaagcaaactcgggagctgctgctggaggaatcctc
tttttcctgagttatatcccctacctgtttctccaacagagatatgccactttgtcatgg
ggcgctaagattgcttcctcccttgtctccaacatagccatgtcatatggaggtcaggtc
atcgggatgtttgagggcacaggagctggtatccagtggtccactatagacaaaggtgct
tcggtggatgatgactttgctatgcttcacattatggtcatgcttttagtggataccgtg
ctgtatatgatgctgactgtttacatagagggggtgttcccgggggagtatggtacacca
ctcaaatggtattttccattaacaaaatcctattggtgtggaactacagccacggatgat
gttccggatgacaaaaggattagcattggccaaaatcccagtttctttgagactgatcca
gtaggaatacgagctggaatccagattcgcaatctcagaagggtgtttggcaagaaagaa
aatagcaaggtagctgtggcgggaatgtccctggatctgtatgaggggcagataactgca
ctccttggccacaatggagctggaaaaacaacaacgatgtcaatgttgacaggttttctg
cctcctagcagtggaacagccattgtgaatggctacgacatccgcgaggacatcggcaat
gtgaggagcagtctaggattgtgtcctcagcatgatgttctttttgacactatgactgtt
gaggaacatcttactttctttgctaagttaaagggatgcccctccaacaaagtggagcag
gaagtagaggacatgctggtggccattaatctgaccaataaaaggaaggctgcgagtaaa
actctgtctgggggaatgaagcggaaactctcggtgggaatagctctgatcgctggatcc
aaggttgttattctggatgagccgtcttctggattggatccagatgccagacgccagatc
tggactgtcctgcagaagaatagagccggacgaaccatgcttctgaccacacacttcatg
gatgaggcagatctccttggagacagaattgcaatcatggctgatggaattctcaagtgt
tgtggaagttccttgttcctgaagaacaagtatggtgctggatatcacatgattctagtc
aaggagccaaagtgcaatgtggaacaagtgttagcaacggtgaagaaatatgttaaaaac
gcagagcaggagagcaacatcggtgctgagctctcgttcaggctgccacacgacagcaca
gcaacctttccagcactctttgatgatcttgattccaataaacagaaatacggagtctct
agttatggagtgtctgtaaccaccatggaggaagtcttcatcagagttggagaaggaaca
gacaagtctcttaatggtatcccaggtcatcacagaaacaatgtgcatgagaacattgac
ttagatctaacaatcaatggaggtcattcagattttgattttgctgctgatggggagcat
aataagaacacaactctacagggacaacagttctatggaatgtttgtcaaacgagctttg
cacactgctagaaacaaactggtgtcagcaacacaggttctcattcctctcttctacacc
atcatggccttgattgtggtcaagacgtttcctggacctcatgattctcaagctctcatc
cttacagtggaaaaatacggagagaacactattgctttcagtgacaatggatatgtaaac
cagtctctcattggtcagttttatgccaatcaatttcagagcagtaaggatcatgtgact
tatatcaatagtgtggaagggtacacaaaaaatccaaatctgaatgactatctgttccaa
aaaggcatcaataatccagggttgtataatttggaatatgcagtgggagcagattttacc
agacatcagaattcagttgtagccacaggttattttaacaatcagggttaccatgctcca
gccatctccttggcaaccctagctaatgctgttcttcagtatatcaccaacagcagcaaa
tttaccctaaccactgttaaccatccactgccgaggaccgaagagcagaagatccgtgag
gaaactcaaggcagcactacgggcttcaccattgcctttaactttgtgtttgggatggct
ttcctctccagtagttttgtcctgttcctgatcaaggagagggctactaaggccaagcac
atacagtttgtcagcggcgtgcagccccttacattctgggcgtcaaccttctgctgggac
ctgatcaattacatgatcccatgttgcatacttctgtttgtgctttgggcctttggcatt
gaagcatactacatcagtggccattctgctcacattctgttgctactctttctgcatggc
tgggccatgctgcctttcatgtaccttttgtctttcatttttaatgtgccatctagtggt
tttgtttggctgaccatgttcaacatattagctggtgatgcgacagttttagctgttggt
attctagggattccccagcttggattgaaggatttggccaatgtcctcgagtggatattt
ttagtctttctgcccaacttctgtcttggacaagggttaatggattactattccaactgg
gaattcttggatagctgtcaagaatacaagcagttctgtactcttttcccaaatccttgc
tgtggcccaatcaatgggcagtgtggagaactgggatgtgtgtattacaatgacaattac
cttggctgggagaagaatggaatcggcagaatgctggtcttcctgttcgttcaaggtctc
atgtacttcaccgtcctgctttttgtggaatctaacctattcaagtccatcatttactac
ctcaagtcaggcaaggtagaagaaaatggacgtccacattcctcttctgagacgacccct
ctgttacaaggagagcgccatttgcttgccaaacaaccacgacattatcagatctctcaa
gtccaggaagattcagatgttgctgctgagagagagcgactggctaagtctcattttctg
acagattccttgattctacagggggtcacaaagtactatggagagtacttggctgtcaat
catatcagcgtaggaataccacagggggagtgctttggtctgctgggtataaatggggcg
gggaaaactacaacttttaagacactgactggagatgagatcatgacatcaggggaagcc
cttctcaatgggcacagtgtcaagtcagagctggctatggtacgacagaatttgggttac
tgcccccagtacgatgccctcattgaccagatgacggggagggaaaccttgtttatgttc
gccaggctacggggggttcaggaacagaggattccaggaattgttgagggtctcatggcc
gctctcctgtttgaggagcatgcagacaaactggtcaaagcttacagtggagggaacaag
aggaagttaagtacggctgtagccttggtgggaaatcccaaggtggtatttttagatgag
ccaactactggaatggaccctgttgctaggcgatatctctggaatgccctgatcaaagtc
agagatactggtagaactctggttcttacgacccacagtatggaggagtgcgaggccttg
tgtacacgactagccatcatggtcaatggagagttccggtgcttgggaagcactcagcat
ctgaaggacaaatttggtcagggctacaccctgctggctaggatcgccttcacagaaacg
ggggaagccccggacatccagcccttcatgaattttgtgcagcaaaaattccctgggagc
gaactcaaagatatgcatcaagggacagttacgtaccatattgctcgtaactctgatgtg
agtctcggaggaatctttggaattttagaaagtgcaaaatcagaattccatatagaggac
tactcagttagtcaaaccactctagagcaggtgtttatcaattttgcgcgttctcagatt
cctccaagggaggtcaatcatggctgctgcaatggctgctgttcttgtttatgctgctgc
agaactcacacacatgatgagtag
DBGET
integrated database retrieval system
