Crassostrea virginica (eastern oyster): 111119929
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Entry
111119929 CDS
T09197
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC111119929
KO
K10314
F-box protein 39
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvn04121
]
111119929
Ubiquitin system [BR:
cvn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
111119929
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
F-box-like
F-box
F-box_5
Motif
Other DBs
NCBI-GeneID:
111119929
NCBI-ProteinID:
XP_022316217
UniProt:
A0A8B8CK54
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Position
2:complement(42789514..42792756)
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AA seq
445 aa
AA seq
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MFEDNDSSWEDLPDILLEDIFVLLEPRHRLEASQVCSRWYETFYAPRVWEHFTLKGNILT
KRRFYVYKGYQRETCPRKTQICLHRVGYLFKKITITPIHDFQHVYEFIRILRAFWDISRN
XPMPLLRTFHFTFTCETRGITGVIVHGTGGKMMEELRHLLRNMKFLKDLKLNNLMLDDAE
VAGLFDAITYNCSETIQTLEILNFTKVPYPILDITLFNNLHTLRTSPQHLDDEVVVILAS
SGVSNLHIFKDXYTCTTDSVSDDAWRLLKQIAPYFRVTLEVRGHTKTPLILQPHAPVTRI
VYDCPNLKFPHETAVWVVHYYRTTLEYFAQKRLPRTHGPRTFHDRGDAAFLMLVRSCPKL
HTLVISERISTATAILVARTKPCLEKFIVRQNGLLKKCDGPKTDNSFSNAELRRVARSYE
TTRDEVSKILGRRWLPMSDRNFKKL
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaagacaacgatagttcttgggaagatttaccggacatcttattggaagacatt
tttgttttgttggagcctcgtcatcgactcgaggcttcacaggtctgcagtcgctggtac
gagacattttacgccccaagagtctgggaacatttcaccctcaaaggcaacatccttaca
aagaggcgtttctacgtctacaaagggtaccagcgagagacttgcccgagaaagacccaa
atatgcctccatcgagtgggttatctcttcaagaaaataaccatcacacctattcacgac
tttcaacacgtgtatgaatttatccgcatactgcgggctttctgggatatttcgaggaat
nttccgatgccattgcttcgcacgttccatttcacgttcacgtgcgagacgcggggaatt
actggggtcatcgttcacggaaccggcgggaaaatgatggaagaactccgacatcttctt
cgaaacatgaaatttttaaaagatttgaagctcaataacctgatgttggacgacgcggag
gttgctgggctgtttgacgccattacgtacaattgtagcgaaacaatacagaccttagaa
attttgaatttcacgaaggttccctatccgattttggacattactctctttaataatctg
cacacgctcagaacaagtcctcaacaccttgatgacgaagtggtcgtcattcttgcgtca
tccggcgtcagtaaccttcatatattcaaggacngctacacgtgtaccactgactcagtg
tccgatgacgcctggcgcctcctcaaacaaatagcgccgtattttagggtcacgttggaa
gttcgaggtcatacaaagacgccattaattctccaacctcacgcccctgtcactcgaatc
gtgtacgattgccctaatttgaaattcccccacgagacagctgtttgggttgtacattac
tatcgtaccacacttgaatattttgctcaaaagcgactcccgcgcacgcatggacctcgg
acttttcacgatcgaggtgacgctgcctttctgatgctagtcagaagctgtccgaagctg
catacattggtcatcagtgaaaggatatcaacagcaaccgccattctggtcgccagaacg
aaaccgtgcttggaaaagtttattgtccgtcagaatggactcctcaagaaatgtgatgga
cccaaaacagacaacagtttcagtaacgcggaattacggagagtcgcaagatcttacgaa
acaaccagagatgaagtctctaaaatcctcggaagaagatggcttcccatgtcggacaga
aattttaagaagctgtaa
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