Crassostrea virginica (eastern oyster): 111120092
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Entry
111120092 CDS
T09197
Name
(RefSeq) LOW QUALITY PROTEIN: double-strand break repair protein MRE11-like
KO
K10865
double-strand break repair protein MRE11
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03440
Homologous recombination
cvn03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111120092
03450 Non-homologous end-joining
111120092
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cvn03032
]
111120092
03400 DNA repair and recombination proteins [BR:
cvn03400
]
111120092
DNA replication proteins [BR:
cvn03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
111120092
DNA repair and recombination proteins [BR:
cvn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
111120092
BRCA1-C complex
111120092
NHEJ (non-homologous end-joining)
MRX complex
111120092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mre11_DNA_bind
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-GeneID:
111120092
NCBI-ProteinID:
XP_022316472
UniProt:
A0A8B8CKV2
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Position
2:23168735..23173139
Genome browser
AA seq
681 aa
AA seq
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MPEEMSDNVFKIIVATDIHLGYGEKDVIRGNDSLVTFEEILENARKHEADFILLGGDXFH
ENKPPRRIMHGCIALLRKHCFGDKPIQFEYLSDQSADFKHCQFPTLNYEDTNLNVSIPVF
SIHGNHDDPSGQGNLCSLDLLHSAGLMNYFGKTTSLDKIEMSPLLMQKGNTKLALYGLGS
VRDERLHRLFVHKNVMMLRPKENQDDWFNVFVIHQNRAKHSTTSYIPEQFLDDFLDLVIW
GHEHECRIDPEWNSSQNFFVTQPGSSVATSLSEGETAKKHIGLLQIKGKDFKITKIPLTT
VRQFYMEDIVLSDTELNPADHDIARKVETYCSEKVEAILEKAGLEHSGNRRQPDKPLVRL
RIDYSGGFEPFSGYRFGQKYVDRVANPKDMIHFTRRKITKVKSDEKDPVIGEVKVDSLDT
SRVEDMVKDIFSTADQNFQLKLLTEKGMGDAVQEYVDKEEKEAILELVKYQLEKTQNYLK
QRNIGEDLIVDEVNRYKEERKKKXEDEAEVKEAIKRAQTKRPKXRDDNDIAMNSDSESPD
SDAPSTSSSTRGTRGRGRGSRGGQTGETTRGKGSRGGRGSRGGRGGRGKAAVVEPSNSSI
MDAFGSQRSRQSSRQSKGSRTGNFESDDEGESIIISDDDLPKMSKKSKPSSAKKKRGITF
DSDSDDDILPQSENDEFDTKI
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaagaaatgtctgataatgtgttcaagatcattgttgccacggacatacatctt
ggttatggggaaaaggatgtgattagaggcaacgactctcttgtcacttttgaagaaatt
ctggagaatgccaggaagcatgaagctgattttattctgctgggaggggacntgttccat
gaaaacaaaccaccacgaagaatcatgcatggctgcatagctttgcttagaaagcactgc
tttggagacaaaccaatacagtttgaatacttaagtgaccaatctgctgattttaagcac
tgtcagttcccaactttgaactatgaagatacaaatttaaatgtttcaatccctgtattt
tctatccatggaaatcatgatgatccatcgggtcaaggtaatttgtgttccttagatctt
cttcatagtgcgggattaatgaactattttggcaaaactacaagtttagacaaaatagaa
atgtcgccactcctcatgcagaagggtaacaccaaactggccctttacggtcttggatca
gtgagagatgagcgtttgcatcgtttatttgttcacaaaaatgtgatgatgctgaggcct
aaagaaaatcaggacgactggttcaacgtctttgtcatccatcagaatcgtgccaagcac
tccaccaccagttatattcccgagcagtttctggatgatttcctggatctggttatttgg
ggacatgagcacgagtgtcgaatcgatccggagtggaacagctcgcagaacttctttgtc
acccagccggggagcagtgtggccacatctctcagtgagggagaaactgccaaaaaacac
atcgggctgctgcagattaaggggaaggacttcaagatcaccaagatacccctgaccacg
gtcagacagttctacatggaggacatagtgctgagtgacacggaactgaatcctgccgac
cacgacattgctagaaaagtggagacttactgcagtgagaaagtggaagcaatattagaa
aaagcaggacttgaacattcaggcaacagaaggcaaccagacaaaccactggtcagactg
cgcattgactacagtgggggatttgaaccatttagtggatacaggtttggtcaaaaatat
gtcgatcgagtggcaaatcccaaagatatgattcactttacacgtaggaagataacaaaa
gtcaaatcagatgaaaaagatcctgtgattggtgaggtcaaggttgatagtttggacacc
tcgagagtggaagacatggtgaaggacatattcagtacagcagatcagaacttccagttg
aagttattaacagagaaaggaatgggggatgctgtacaggagtatgtcgataaagaggag
aaagaggccatcttagaactagtcaaataccaactggagaaaacacagaactatcttaag
caaaggaatattggtgaagacttaattgttgatgaggtcaaccgatacaaagaagaaagg
aagaagaagnaagaagatgaagctgaggtcaaagaagccattaaaagagctcagacaaaa
cgccccaagnatcgggatgataatgacatcgcaatgaacagcgactcggagagccctgat
tctgatgccccatcaacaagctcctccacaaggggaacaagaggaagagggaggggtagc
cgagggggccaaacaggggaaacaaccagaggaaaaggttccagagggggtagaggaagt
cgtggggggcgagggggaaggggcaaggctgcagtggtagaaccctcgaacagttccatc
atggatgcatttgggtctcagaggtctagacaatcctcaagacagagtaaagggagtaga
acaggcaattttgaatcagatgatgaaggggagagcattatcatctcagatgatgatctg
ccaaaaatgtcaaaaaaatccaaaccttcctctgccaagaagaaaaggggcataactttt
gactcggattctgatgatgatatattgccacaaagcgaaaacgatgaatttgatacaaaa
atataa
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