Crassostrea virginica (eastern oyster): 111120135
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Entry
111120135 CDS
T09197
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX4
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvn03036
]
111120135
Enzymes [BR:
cvn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111120135
Chromosome and associated proteins [BR:
cvn03036
]
Eukaryotic type
Gene silencing
piRNA pathway
111120135
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
zf-CCHC
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
111120135
NCBI-ProteinID:
XP_022316564
UniProt:
A0A8B8CMZ6
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Position
2:complement(30208644..30219182)
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AA seq
768 aa
AA seq
DB search
MGGRGRGILGNKNGFGRGGFGRGASSATEATGPGRGRGVLRAGFTVNGNDDVTNGVGGMS
INKPGGMSNGFGKDSAVGALDQMEEVVGVDSAVVEELTGEDLVLEEAVGVEEEDSEGATG
EDSAVVGVLETRLKETIMVEVLGEDPREDLAPKKREVLEEGALVRMTESLQDLVVDSVVG
TDLLGEEDLEGVVLDAETVEKRVTLPENVHSPEVVGVGVTEHVGIVVKRVTLPENVPILK
WRRGRRRRWKCFKCQEEGHMARDCPNAPALDPDRPAPYVPPXPSEDEAEIFKVIQKGINF
DKYDKIPVEVTGRGPPPAIRDFSEAGLYDKFLENVRKAKYEKPTPVQKYSIPIVMSGRDL
MACAQTGSGKTAAFLLPVLTGMMKNGISGSSFSEVQEPQALVVAPXRELAVQIFMDARKF
AHGTMLRAVVLYGGTSVGYQLRQVEQGTHILVGTPGRLIDIIGKGKISLSKLKYXILDEA
DRMLDMGFGPEIRKIVEELGTPPKTERQTLMFXATFPEEIQKMAGDFLNDYLFLTVGRVG
GACTDVTQTVLEVDRQEKRSRLCDILTETGSEKTLVFVEQKRNADFLASYXSQNGFPTTS
IHGDRLQAEREEALRDFKLGKAPVLIATSVAARGLDIPLVKHVVNYDLPQSIDEYVHRIG
RTGRCGNLGKAISFYSNDTDGALAKPLVRILSDAMQEVPAWLEEYXKTSMPGAGYADVGA
KFGGRDIRKNQPRTRETHKGEGGYPLGAGGSVSVGAGGAQEEDEENWD
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgggaggtagaggtcgtggtatcctaggaaacaagaatggttttggccgtggtgggttt
gggcggggtgcatcatcagcaacagaagctacaggaccaggtagaggtcgaggagttctt
cgtgctggttttacagtgaatggaaatgatgacgtaacaaatggggtgggtggcatgtcc
atcaacaaaccaggaggaatgagtaatggatttggaaaagactcagcagtgggggctttg
gatcaaatggaggaagtggtgggggtagattcggcagtggtggaggagctgacaggggag
gatttggttctggaggaggcagtgggggtggaggaggaggattcggagggggcgacaggg
gaggattcggcagtagtgggggttttggaaacaaggctgaaggaaacaataatggtggag
gttttgggagaggatcctcgggaggatttggcgccaaaaaagagggaggttttggaggag
ggggctttggtaagaatgacggagagtcttcaggatttggtggtggattcagtggtgggg
acagacctcctaggggaggaggatttggagggggtggttctggatgcagaaactgtggag
aagagggtcactttgccagagaatgtccacagccccgaagtggtgggggtgggggtgaca
gagcatgtaggaattgtggtgaagagggtcactttgccagagaatgtcccaatcctaaag
tggaggagggggaggaggaggaggtggaagtgttttaagtgtcaggaggaaggtcacatg
gcaagagactgtcccaatgccccagcacttgatcctgacagacctgcaccttatgtacct
ccgngcccatctgaagatgaggcagagatttttaaagtgattcagaagggaatcaacttt
gacaagtatgacaagatcccagttgaggtgactggcaggggacctcctcctgccatccgc
gatttcagtgaggccggcctgtatgacaagtttctggaaaatgtgcggaaagccaagtac
gagaaacccactcctgtacagaagtactccatacctatagtaatgtctggacgtgatcta
atggcttgtgcacaaactggctctggaaaaacggctgcctttttgctgccagtgctgaca
ggaatgatgaaaaatggaatttcaggaagtagtttctcagaagtccaggagccccaggcc
ctggtggtagctcccnacagagagttggctgttcagatcttcatggatgcccgcaaattt
gcccacggcaccatgctacgagcagtggtcctttacggggggacctcggtgggctatcag
ctgagacaggtggagcagggcacacatattctcgtgggaactccaggacggctgattgat
atcatcggaaaaggaaaaatcagtctctcaaaattgaaatatnttatattggatgaggct
gacaggatgttggacatgggctttggtccagaaatcaggaagattgtggaggagctggga
acaccccccaaaacagagagacagaccctaatgtttncagctaccttcccagaggaaatc
cagaagatggcaggagacttcttgaatgattatctgttcttgacagttggtcgagtgggt
ggagcttgcaccgatgtgacgcagacagtgttagaggttgatcgacaagaaaagagatct
cgattgtgtgacattctaacagaaacagggtcagaaaaaacgttagtatttgtggaacaa
aagagaaatgccgatttcctggcatcatacncttcgcaaaacggattcccgacaaccagt
attcatggagatcgacttcaagcagaaagagaggaggctttgcgtgattttaaacttgga
aaggcaccagtattaattgctacatcagtggcagctcgtggattagacatcccactagtc
aaacatgttgtcaattatgatctcccacaatccatcgatgaatatgttcacaggattgga
cgaactggccgctgtggtaacctgggcaaggccatcagtttttactcgaatgatacggat
ggggctttggccaaaccccttgtcagaattctttcagatgcaatgcaagaggttcctgct
tggttggaggaatatntcaaaacaagtatgccaggagctggctatgcagatgttggcgcc
aagtttggtggcagagatatcagaaaaaatcaacccaggaccagagagacccacaagggt
gagggagggtacccgcttggtgctggtggttcagtctctgtgggagcaggtggcgctcag
gaggaggacgaggagaactgggattaa
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