Crassostrea virginica (eastern oyster): 111120158
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Entry
111120158 CDS
T09197
Name
(RefSeq) LOW QUALITY PROTEIN: transformer-2 protein homolog alpha-like
KO
K12897
transformer-2 protein
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111120158
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cvn01009
]
111120158
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvn03041
]
111120158
Protein phosphatases and associated proteins [BR:
cvn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111120158
Spliceosome [BR:
cvn03041
]
Common components
Common spliceosomal components
SR proteins
111120158
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
111120158
NCBI-ProteinID:
XP_022316593
UniProt:
A0A8B8CL69
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All DBs
Position
2
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AA seq
314 aa
AA seq
DB search
MSRSHSRESEGXHKSDASYSHSRSPSNEKGSPKSRDSRSKSRSKSXYRRSSRRYSGSRSR
SRSHSRGHKRDRSRSRSYHRDRYSRSRSRGSYHKRSRYSRSRSRGRSPNYRDHYSRESRG
SRYRXRSRSPGYGRRRRGKETSPMSNRRRHTGNRDNPEPTKCLGIFGLSLYTQERDLREV
FGRFGPLEDVQVVYDRQTGRSRGFAFIHFRNVEDAIEAKDRGPGMEIDGRRIRVDFSITT
RAHTPTPGIYLGKPTASSYSRRRSPSPYYRGGEGEGGGGGGGGYSRGSRYSRSRSRSRSY
SPRFEERKMKRTLG
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaggtcgcattccagagagtcggagggtncacacaaatcagatgcctcatactcg
cactcccggtctccatccaatgagaaaggatctcccaaatccagggattctcgatctaaa
tcccgatccaaatctncctacagacgttcctcacggcgttactctggctccagatcacgg
tcacgatctcactccagaggacacaagcgtgacaggtcaagaagccgatcctatcataga
gaccgctattcaagatcccggtcccgcggcagttatcacaaaaggtctcgatactcaaga
agtagaagccgggggaggtcccctaactacagagaccactacagcagggagagtcgcggc
agtcgctacaggnagcgcagccgatccccggggtacggcaggcgacggagaggaaaggaa
acgtcacccatgtccaacagacgcagacatactggaaatagagataaccctgaaccaacc
aaatgtttgggaatttttggtctgagtttatacacccaggagcgagacctgagagaggtg
tttggtcgatttggtcctttggaagatgtacaagtagtatatgatagacaaactggacga
tcaagaggctttgcgttcatccacttcagaaatgttgaagatgccattgaggccaaagac
cgtggtcctggaatggaaattgatggaaggagaattcgagtggatttctccatcacaaca
agagcacacacccctacacctggaatttacctaggcaaacctacagcgtccagttacagt
agaagacggtcaccatctccctactacagaggaggggagggggaggggggaggaggagga
ggagggggctacagcaggggaagtcgatactccagatccaggtcaaggtcaaggtcctac
agtcctcggttcgaagaaagaaaaatgaagagaactctcgggtaa
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