Crassostrea virginica (eastern oyster): 111120219
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Entry
111120219 CDS
T09197
Name
(RefSeq) NACHT domain- and WD repeat-containing protein 1-like
KO
K24734
NACHT domain- and WD repeat-containing protein
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cvn04990
]
111120219
Domain-containing proteins not elsewhere classified [BR:
cvn04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
111120219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
NBCH_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_SPT8
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_Vps41
Beta-prop_NWD2_C
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
WD40_like
NACHT
Beta-prop_DCAF4
AAA_22
Beta-prop_IP5PC_F
NPHP3_N
WDR54
AAA_16
VPS8_N
Beta-prop_WDR35_TULP_N
TniB
Ge1_WD40
NB-ARC
DUF4062
Viral_helicase1
DUF3419
ATPase_2
Beta-prop_IFT140_2nd
VapE-like_dom
AAA_11
DUF7099
Motif
Other DBs
NCBI-GeneID:
111120219
NCBI-ProteinID:
XP_022316656
UniProt:
A0A8B8CQF8
LinkDB
All DBs
Position
2:complement(28635624..28653886)
Genome browser
AA seq
1530 aa
AA seq
DB search
MAGDPRTTYKSAVQNILSGRLQDIPELPRQTVKIYVCSNYSEFEAERTALLKDTFPTLQH
HCLKYGIDLHWVDPHHGSHVDHTKDTHRFQRHLSVMEECHKGSSGPFFVCLLGSKYGECP
LPNYLDEAEFKHIRNEAFEGGKDIRLLDEWYLRDGYTVPVLYKLNPNQHFSKNLQFNVNP
RENRQLNDWSDTYSNLLDIIQYGAKIAHDEGNINQVHLQKQERFFTSGLEHEISQALKLG
CREGVFIFRNLEGLAEAKDNEYRACHMDITPKGEVDSAKLERLNNLKYEVDSKIPSTNKF
TFTISADDSGLSKENTDHMTYLENMTAAVAMRLRDLFDEYEKTKLHFPSTKKGELCLETL
IHLQHCKKLLKVYNGTGLEYLLSKIQMLLMHGTKTDHQLIIVKGDPGCGKSHFLSKVCSR
ARELFGKDTVLIPRFIGITPKSKDKQQILRDICVQLNFVLQQNISLEEYDESHLTNYFYG
LANRISKGQHNLVIMLDGVNNLENPTSGDNPSMIDWFSVKLPPKVHLIISYRPHDNFLFQ
KLEGKRNNVIDSMIIFPVWTTERIGDALTFTLAKHKRVIAKNKEKLLINHLQKASPFVLQ
NVLHMLTEWHVDYNFINNHFPLSNEEIVHKQLDQLEFRFGHEIVEAVCRYITLSNFGLSE
TELLDILSCNNDVILTIIRSCNSEVFRFPWFLWIHLKTELGLLLVQRFVHRKILLSWSHG
FVEDIIRRRYMANVDSICGIHSDLSELFLETWIEGKQIPFQGNTPLKEDTQRFVCHQPLL
YSETRYNKRKINELWTHLLQLGDSKRLKEHALCNFEYLLSMVDSSSINTVLQNLRLTLSI
LVDAEIFLIYNCLLKSSSVLMRHPTQLANELIGHLKEVKDYFPSYIEPLVTQSMQWCDTY
NEPLFIPMSSWLPSPYTPLIASIDCLDGANLIAPLRNNQHILCSYGLLDIAMYHVPSKKL
LKLFSGHRNSIRCIILSTNEQYCISGSEDGTVRFWKFAEGLCTSVIREHLGAVLCLTVTP
NDAIVFSGSDDTTIVEFSVLSGKRIGVLKGHSKAVTALKLNSNVDLLASASRDSKIIVWC
MQEKTQLLVVDDIHSPISCMDLTLDNTFLLAGCEDSSLNVVAFTTGSWIHQLKGHKGWVR
SLALAKNCHHVFVGCQDNMVYLYNFRTTELLDVFQGHTSSVTDVRLSQDQSIVFTASEGK
VNLWSFLPKMTKHVTTDEHNCTVSCVGITSDGKIGLSGGTDGEIKLWNLETNKYSESFIG
HSGPITCIECATNGAFTVTAAEDKKVKVWSMTLAMVITNYERHEHFVRARVWKTNSGTLV
TGICHSEKITCLCCDVSDQYLVTGSEDKSCKVWDLTSGKLTQVLVEHSACVIKVAINSDG
TTVISGATDGCIMVWEVSTSKDGTIRLWDVVLGLHVAMIDMHFPVLNCLMSEDCCKIMVH
LENCKRVPLLCLHNCPEPCVSPRTEPHFNYANRNEDVSPILPIHPKISSCDRFSIVYPIP
KKPERRSTSSPLPEIVRVCAYFLSMFSTSL
NT seq
4593 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagatccgagaactacgtataaatcagcagtgcagaacatactctccgggaga
cttcaggatattccggagttaccacggcaaaccgttaaaatctacgtgtgttctaattac
tcagaatttgaagcagagaggactgcacttttgaaagacacatttccaacacttcagcat
cactgtttgaaatacggtatcgatctgcactgggtggaccctcatcatggcagtcacgtg
gaccacaccaaagacactcacagatttcagcgccacctatctgtcatggaagaatgtcat
aaaggatcttcaggtcctttctttgtctgtctcctcggatccaagtatggagagtgtcct
ttacctaattatctcgatgaagctgagttcaaacatattcggaatgaagcatttgaaggt
ggaaaagatattcgcctcttagacgaatggtatctcagagatggctacaccgttccagtt
ctgtacaaacttaatccaaaccaacacttctcaaagaatttgcagtttaacgttaacccg
agggagaaccgtcaactcaatgattggtctgatacctactcaaatctattggatatcatt
cagtatggcgccaaaatagctcacgacgaaggaaacattaatcaagttcatctccaaaaa
caagagagattttttacttccggtctagaacacgaaatatcacaagctctaaaacttgga
tgcagagaaggggtttttattttcagaaatttggaaggtttagcagaagcaaaggacaat
gaataccgagcttgtcatatggacataactccaaagggtgaagtggattcagcaaagcta
gagagactaaacaatttgaagtatgaagtagattccaaaattccgagcacaaataagttt
acatttaccatatctgctgacgacagtggactttcgaaagaaaacacagatcacatgaca
tatctagaaaatatgactgccgcagtagcaatgagattgagagatttatttgatgaatac
gagaagaccaaacttcattttccgtccacgaaaaaaggagaactatgtcttgaaactttg
atacatttacagcactgcaaaaaattattgaaggtgtacaatggaactggtttagaatat
ctcttatctaaaatacagatgctacttatgcacggaacgaaaactgatcatcaactcata
attgtgaaaggcgatcctggttgtgggaaatcgcattttctttcgaaggtttgttcacga
gctagagagctttttggcaaggacacagtactcattccccgttttattggtatcactcca
aaatcaaaagataaacaacaaattttgagggacatttgtgtgcaacttaattttgtgttg
cagcaaaacatatctcttgaggaatatgatgaatcacacctgacgaattatttttacggt
cttgccaatcgcatttcgaagggtcaacacaatcttgtgattatgttagatggtgtgaat
aatttagaaaacccaacaagtggagataatccatcgatgattgattggttttcggtcaaa
cttcctccaaaagttcatctcatcatttcttaccgaccacatgataactttctcttccaa
aaacttgaaggaaaaagaaacaacgttattgatagtatgatcattttcccagtgtggacg
actgagcgtatcggggatgcattgacttttactcttgccaaacataagagagtcattgca
aaaaataaagaaaagcttctgattaatcatcttcagaaagcgtcaccctttgtgcttcaa
aatgttctgcatatgctgactgaatggcacgtagattacaatttcataaacaatcacttt
ccattatctaatgaagaaatcgttcataaacagttggaccaacttgaatttagatttgga
cacgagattgtggaagcagtctgtcgctatatcacgctttcaaacttcggtcttagtgaa
actgaacttctggatatactttcatgcaataatgatgtgatattgactatcatacgatca
tgtaattcagaggttttccgtttcccttggtttctatggatacatttgaaaactgaattg
ggtttactacttgttcagcgttttgtgcacagaaaaattctactcagttggtctcatgga
tttgtggaagatatcattcgaagaaggtacatggcaaatgtagacagcatttgtggtatt
cactccgatctttccgaattgttcttggagacatggattgagggaaaacagatccctttt
caggggaatacacccctaaaagaggatacccagaggtttgtgtgtcaccaacctcttctc
tacagcgagacaagatacaacaaaaggaaaatcaatgaactctggacacacctactgcag
ttaggtgattctaaacgcctaaaggaacatgctttatgtaactttgaatatttactctca
atggtcgattcatcttcaataaatacagtccttcagaaccttcggttaaccttatccatt
ttggtcgatgctgagatttttctgatatacaactgcttgctaaaatcatcgtcagttctc
atgcgacatccaacgcaattagcaaatgagctaattgggcatttgaaagaagttaaagat
tattttccgtcttacatcgaacctcttgttacccagagtatgcagtggtgtgatacgtac
aacgaaccattgtttattccaatgtcttcatggcttccctccccttacacccctttgatc
gcttcaattgactgtttggatggcgccaacctcatagctccactccgcaacaaccagcac
attctgtgctcctacggtctgcttgatattgcgatgtaccatgttccgtccaaaaagttg
ctcaaattgttttccggtcatcgaaacagcatacgctgtattattttgtccaccaacgag
cagtattgtatcagtgggtcagaggacggcaccgtcaggttctggaaatttgctgaagga
ctgtgtaccagcgtcatacgagagcatctgggtgctgttctatgccttacggtaaccccg
aatgacgcgattgtattcagtggttctgatgacacaaccattgtggaattctctgttcta
agtggaaaacgtataggtgttcttaaaggccattcaaaagccgtgacagccttgaaactg
aacagcaatgtcgatcttcttgcatcggcttctcgagacagcaaaataattgtttggtgc
atgcaagagaaaactcaacttttggttgtagacgatatccactcaccgatatcttgcatg
gatttgactcttgataatacattcctgctggcagggtgtgaagacagtagtttgaatgtt
gtggcatttaccacgggatcgtggattcaccaactgaaaggacataaaggatgggttaga
tctctagccctggcgaaaaattgtcaccatgtgtttgtcggttgccaagacaacatggtt
tacctgtacaatttccggacaactgaattgttggatgttttccaaggccatacttcatcc
gtcactgacgtcagactctctcaagatcagtccattgtcttcacagcatctgagggaaag
gtcaatttatggagttttttgcccaaaatgactaagcatgtgacaactgacgagcacaac
tgtacagttagttgcgtgggcatcacgagtgatgggaagataggattatcaggaggcacc
gatggtgagattaaattatggaatttagaaacaaacaaatattcggagagttttatcgga
catagtggccccataacctgcatcgagtgcgcaactaatggggcgttcacggtaacagca
gctgaggacaaaaaggtcaaagtctggagtatgaccctggcaatggtcataacgaactat
gagagacacgaacactttgtacgtgctcgggtttggaagactaattccggaacattagtt
accgggatatgccattctgagaagatcacgtgtctttgttgtgacgtcagtgatcagtac
cttgtcaccggctcagaggataaatcctgcaaggtctgggacttaacatctggtaaactc
acacaggttttagtcgagcatagtgcctgtgtgatcaaagtagccattaacagtgatggc
actactgttatctctggggccacagatgggtgtatcatggtttgggaggtatccacatct
aaagatggcaccatcagattgtgggatgtggttttgggtctccatgtggcgatgattgac
atgcacttccctgtcttgaactgcctgatgtcggaagactgctgtaaaattatggttcat
ttagagaactgtaagcgagttccgttactttgtcttcacaactgcccagaaccttgcgtc
tcgccaaggacagaaccccacttcaattacgccaaccgcaacgaagacgttagtccaata
ttgcccatacaccctaagatatcctcttgtgaccggttttccatagtgtaccccattcca
aagaaaccggagcgaaggtcaacttcatctccattaccggaaatcgttcgagtatgtgcc
tactttttgtctatgtttagtacatcattgtga
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integrated database retrieval system
