Crassostrea virginica (eastern oyster): 111120349
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Entry
111120349 CDS
T09197
Name
(RefSeq) WD repeat-containing protein 18-like
KO
K14829
pre-rRNA-processing protein IPI3
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cvn03009
]
111120349
Ribosome biogenesis [BR:
cvn03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
111120349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
EIF3I
WD40_CDC20-Fz
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WDR55
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_VPS8
Beta-prop_NWD2_C
Beta-prop_HPS5
Beta-prop_Nup120_160
WD40_alt
Motif
Other DBs
NCBI-GeneID:
111120349
NCBI-ProteinID:
XP_022316779
UniProt:
A0A8B8CNL6
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Position
2:complement(46634365..46639108)
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AA seq
441 aa
AA seq
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MTSNEILLTSEVTGQLWNVCVWDPESGTSVVTFKGGTSAPHGLAVLGHQYLVSASPTKPV
LTLWPLHKRDTTCSKMVCPGNISALDITEDGCYIVAAIAEKIYIWQVCSGRLLSILSRHY
QTITCLKCSSGLIVSGGEDSLVIVWSLEKALCEQVESKAPVIPEQVWSSHSLPVTDLQVG
VGGHLSRVVSSSLDQTCRLYDVNSGELLCTFVFEVGICSVVMDPAEYRLFAGGSSGSIYA
VNLFETPVRRERHITEKKEDQSCLRFDGHEKQVTCLCVTMDGCQLVSGSHDHKVKIWDIF
SGQCLRTIELKGPLTNVQLTMVTPGLVNPDVKYKLPIQPLQRVFHADAREDVGQVTLNLL
LHGENEEAEIEENILEAESEIMMDLKYRAEGSENTNANEICANVRAEDFENSSELANLRK
ANKELFHFAVSKLLHNDQYDK
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaaacgaaattttactgacaagtgaagtgactggacagttgtggaatgtgtgt
gtctgggaccctgagtcaggaaccagtgttgtgacattcaagggagggacaagtgccccc
cacggtctggcagtgctagggcaccagtaccttgtcagtgcttctccaaccaaacctgtg
ttaactctttggcctcttcacaaaagagacaccacatgttccaagatggtttgtccagga
aacatttcagccctggacattacagaagacggatgttatattgtggcggcaattgcagag
aaaatctacatttggcaggtatgcagtggccgattactcagcatcctgagcagacattac
caaaccatcacatgtctgaagtgttcctctggtttaattgtgtcgggcggagaggacagt
ttagttattgtgtggtctctggaaaaagccctatgtgaacaagtagagagcaaggcccca
gtgatacctgagcaggtgtggtccagccactccctccccgtgacggaccttcaggtgggg
gtggggggacacctgtcaagggtagtctcctcctccctagatcagacctgtcgtctctac
gatgtaaacagtggcgaattgttatgtacttttgtatttgaggtgggcatctgttccgta
gttatggacccagctgagtaccgtctgtttgcaggaggcagttcagggtccatctatgct
gtgaatttgtttgagacacctgttaggagagagagacatatcactgagaagaaggaagac
cagtcatgtctaagatttgatggacatgagaagcaggtcacatgtctatgtgttacgatg
gatggatgccagctggtgtcagggtcacatgaccacaaggtcaaaatctgggacatcttt
agtggacaatgtctgaggacaatagaactcaaagggccattgaccaatgtccagctcacc
atggttacgcctggccttgtgaaccctgacgtgaagtataagcttcctatccagcccctg
cagagggtgttccatgccgatgccagggaggacgtggggcaggttacactgaacttgctg
ctccatggagagaatgaagaagcagagatagaggaaaatattcttgaagctgaatcagag
ataatgatggatttaaaatacagagcagaaggatccgagaacaccaatgcaaatgaaata
tgtgccaatgtaagagcagaagactttgaaaattcatcagaacttgctaaccttagaaag
gcaaataaagaactttttcattttgcagtcagtaaacttttacataatgatcaatatgac
aaataa
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