Crassostrea virginica (eastern oyster): 111120530
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Entry
111120530 CDS
T09197
Name
(RefSeq) very low-density lipoprotein receptor-like isoform X1
KO
K20052
low-density lipoprotein receptor-related protein 8
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvn04131
]
111120530
Membrane trafficking [BR:
cvn04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
111120530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
SGL
EGF_CA
Motif
Other DBs
NCBI-GeneID:
111120530
NCBI-ProteinID:
XP_022317029
EnsemblRapid:
LOC111120530
UniProt:
A0A8B8CPB0
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All DBs
Position
2:14204328..14214497
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AA seq
941 aa
AA seq
DB search
MNVLFHSPLLLVFILLSLSQLTFCNTDADATLTCEDNQFKCMRRCIPISWRCDGDYDCVD
EDDKTDEANCPARTCAEDEFTCKSGHCVPMKWTCDKETDCLDGSDETDICQNKSCTMDQF
SCGNGECIPASWRCDGSPDCANGQDETCSSPTCASDEFRCDNSKCVNNKWRCDGDNDCED
GSDETKCPSVSCTVDEFQCSDKQCIDKLWQCDGDPDCNDQSDEINCSTNDTMLCSVETEW
ECHTGEQCIHKSWKCDGDEDCLDGSDESQCNTTCRPDQFKCDNRDCIYISLKCDGYIDCM
DGSDEANCPTPVPLCPSDKFDCYKNGTLCIEASKLCDGRKDCENFADEGNELCETNSTTS
AREKFANPCNLNNGGCMQTCIPVGAKNRRCECLDGFRLVGNTSCEDINECAQWPPVCSQK
CINEVKGSYKCECMSGYYPEILKDGQHVCKAIGERPWLLFANRHDIRRLEVDTMILQPVV
SDLHSAIAVDYDYYNKVVYWSDSLEEKIMKADMTEKGETNGTGVPVIGSGVKTPDGIAVD
WIHHNLYWTDTGYNTIEVASGDGLMRKILVEKDLDEPRSIALDPRNGWMYFSDWGKDPKI
ERIGMDGNPASRKAIVKEDIVWPNGLCLDYASERIYWIDAKLKSIFTADLDGSNVHRILH
NAAQILHPFSLTVFEDNVYWTDWSSEAIRKVHKYTGEEYSQLALGLRAPMDIKVYHQQKQ
LHSPNKCGAANGGCSHLCLPTPAEVNAIGYACACPDNMVLLNGKQCEASAQRTTSSPLPT
PPSKTDSPNNTNRNSSSSHGVTSGPTTGAPTAQPASTPKPVVTEKPNVPINPNTPKQPEI
KPISTDSPYDIVTPAKNNNETVIRKSTESPVGTVAVIAIAVVLGLAVLVVIIGCFVYRKY
TKRNIKSMNFDNPVYRKTTEETVRIQRDSALEPLNADSMEV
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgttattccactctccgctgttacttgtatttattttactatccctaagtcaa
ctaacgttttgtaacacagatgccgatgcgacccttacttgcgaagacaatcagttcaaa
tgcatgagaaggtgcattccaataagctggaggtgcgatggcgattacgactgcgtagat
gaagatgataagacggatgaagcaaattgtcctgcccgaacatgtgctgaggatgaattc
acttgtaaatctgggcattgtgttccaatgaaatggacttgtgataaagaaacagactgt
ctcgatggatctgatgaaacagatatatgtcaaaacaaatcttgcaccatggaccagttt
agttgtggtaatggcgaatgtatcccagccagttggcgctgtgatggctccccagactgt
gccaatggccaagacgaaacctgctcctctcctacatgtgcaagtgatgaattcagatgt
gacaactcaaaatgtgtcaacaacaagtggagatgtgatggagataatgattgtgaagac
ggtagcgatgaaaccaaatgcccatctgtctcttgtactgttgatgagtttcagtgctca
gacaagcaatgtattgacaaactgtggcagtgtgatggagaccctgactgcaatgaccag
agtgatgaaatcaactgctcaacaaatgacacaatgctctgctcagtggaaacagaatgg
gagtgccacacaggggaacagtgtatccacaaatcctggaaatgtgatggagatgaggat
tgtttggatggatctgatgagtcgcaatgtaacacaacctgcagaccagatcaattcaaa
tgtgataacagggactgcatctatatctccctgaaatgtgatggctatattgattgcatg
gatggttcagatgaggccaattgtcccacaccagtacctctttgtccaagcgacaagttt
gattgctacaaaaatggaaccctgtgtattgaagccagcaaactctgtgatggccgaaaa
gactgcgaaaactttgcagatgaaggcaatgagctttgtgaaaccaattcaacaacttca
gcaagagaaaagtttgcaaatccatgcaatttgaacaatggcggttgtatgcaaacatgc
attcctgttggtgccaaaaaccgacgttgtgagtgtttagatggattccgacttgtgggc
aacacttcgtgtgaagacatcaatgaatgcgcacagtggccccctgtctgctctcagaag
tgcatcaatgaggtgaaaggatcttacaaatgtgaatgcatgtctgggtactacccagaa
attcttaaagacggtcaacacgtttgtaaagcaattggtgagagaccctggttgttgttt
gccaacagacatgacatccgaagactggaggtggataccatgatactacagccagttgtc
agtgatctgcatagtgctattgctgtagactatgactactacaacaaagttgtgtactgg
tctgatagcctggaagagaaaatcatgaaggctgatatgacagaaaagggagaaaccaat
ggcactggagtgcctgttattggcagtggtgtgaagacccctgatggaatagccgtggac
tggatccatcacaatctgtactggactgacaccgggtacaacaccattgaagttgcttct
ggagatggattaatgaggaaaattcttgttgaaaaagacttggatgaacctaggtcaatt
gctttggatccaagaaatgggtggatgtatttctctgactggggaaaagatcccaagatt
gagcgaattggaatggatggtaaccctgcgagtagaaaagctattgtgaaagaggatatt
gtatggccaaatggattatgcttggattatgccagtgaaagaatttattggattgatgct
aagttgaagagtatattcacagctgatctagatggaagcaatgtccacagaattcttcac
aatgctgcgcaaatccttcatccattttcattaactgtttttgaggataatgtttattgg
acagactggtcatcagaggccattcgcaaagtgcataaatacacaggagaagaatatagc
caactggcccttggtttgagagcaccaatggatatcaaagtgtatcaccaacagaaacag
ttgcacagtcccaacaaatgtggcgcggcgaatggtggttgttctcatctttgcttgcca
accccagcggaggtcaatgctattggatatgcttgtgcctgccctgacaacatggtgctt
ttgaatggaaaacaatgtgaagcaagtgcacaaagaacaacttcaagtccattaccaact
cctccatctaagacagattcccctaataatacaaacagaaactcttctagttctcatggg
gtaacatcaggtccaactactggagcccccacagcacaaccagcatccacccccaagcct
gtagtaacagaaaagcccaatgttccaataaatcccaacacaccaaaacaacccgagata
aaacctatcagcactgatagcccctacgacattgtgaccccagccaaaaataacaatgag
actgtcatcaggaagtccacagagagtccagtgggaacggtggccgtgattgctattgct
gtggtgctaggattggctgttctggttgtcattattggttgttttgtttatcgaaagtac
acgaagaggaatatcaagagtatgaattttgataatccagtctacagaaaaacaactgaa
gaaactgttcgcatacaaagagactctgccttagagccactgaatgctgattctatggaa
gtttga
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