Crassostrea virginica (eastern oyster): 111120700
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Entry
111120700 CDS
T09197
Name
(RefSeq) intraflagellar transport protein 52 homolog isoform X1
KO
K19681
intraflagellar transport protein 52
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cvn03037
]
111120700
Cilium and associated proteins [BR:
cvn03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
111120700
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GFIT
Motif
Pfam:
IFT52_GIFT
IFT52_central
Itf52_C
ABC_transp_aux
OST48_N
DUF4350
DUF2194
Motif
Other DBs
NCBI-GeneID:
111120700
NCBI-ProteinID:
XP_022317330
UniProt:
A0A8B8CED5
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Position
2:48212444..48218679
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AA seq
443 aa
AA seq
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MAPTTEGMDEKAQRNVIVFNQSKNEIFSPNNGLKTLNRKLRSTWKIQSNKGEITPETLSS
ASLFVLCGSREKYTGSELESIKRYIDGGGSVLVLLGEGGETRFETNINFLLEEYGIMINN
DAVVRTSYYKYFHPKEALIANGVLNRAVSQAAGKTFSMDEDGNNAQALSFLYPYGATLNV
MKPATALLSTGSVSFPLNRPVCALYENRNHGKLVVLGSVHMFSDQYIDKEENSKVLDVLI
RCLTTDEIKLNPIDAEDPEISDYNMLPDIAKLAGQLKTCLQESDDVPRDITMLFDNSLFK
LDTSLVPNAIKAFKQLNVKHEPLTLITPQFETPLPPLQPAVFPPQFRELEPPKLDLFDLD
EQFSSEKVRIAQQTNKCSDDDLEYYVRECGDILGVTSNLPQDSRDAKHILEYIFTQVVEF
KKLNQEQDYDTTQFGGGGGFDQY
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgaccacagagggaatggatgaaaaagcacaaagaaatgtgattgtgttcaat
cagtcaaagaatgagattttctctccaaataatggactgaagacattaaacagaaaactg
cgctcaacatggaagattcagagcaacaaaggagaaataactccagaaactttgtcctct
gcaagtttatttgtgttgtgtggtagcagagaaaaatatacaggttcagagttggaatca
ataaaacgttacattgatggaggcggaagtgtgttagttcttcttggagagggaggagaa
actcgatttgagaccaatatcaatttcctgttagaggagtatggaatcatgatcaataac
gatgctgttgtgagaacttcatattacaaatatttccatccaaaagaagcattaatagca
aatggtgtattaaacagagcagtaagccaggctgcaggaaaaacattttcaatggatgaa
gatggaaacaatgcacaggccctttccttcttgtacccctatggggccacactgaatgtg
atgaagccggccactgccctgctgtccacgggctccgtatccttccctctcaaccgacca
gtctgtgcgctgtatgaaaacaggaaccatggaaagttagtggtgttgggatcagtccac
atgttcagtgatcagtacatagacaaagaagaaaacagcaaagttctggatgtgttgatt
cgatgtttgacaacagatgaaatcaaactaaatcctattgatgctgaggatccagagatc
tctgactacaacatgctacccgacatagccaagttagccggccagctgaagacctgtcta
caggagagtgacgacgttcccagagacatcaccatgctgtttgacaactccttgttcaag
ctggacaccagcctggtcccaaatgccatcaaagcctttaagcagctgaatgttaagcat
gaacccctgaccctcatcacccctcagtttgagacgcctctaccccctctacagccagcc
gtgtttcctccccagttccgagaactggaacctcccaagttggatctctttgaccttgat
gagcagttctcgtctgaaaaagtcagaattgcccaacaaaccaacaaatgttcagacgac
gatctggagtactatgtcagagaatgcggcgacatccttggtgttacgtcaaatttacct
caagattccagggatgcaaaacatatcttagaatacatctttactcaagttgtggagttc
aagaagttgaatcaggagcaggactatgacaccactcagtttggaggaggaggagggttc
gaccagtactga
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