Crassostrea virginica (eastern oyster): 111120738
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Entry
111120738 CDS
T09197
Name
(RefSeq) RAB6A-GEF complex partner protein 1-like
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvn04131
]
111120738
Membrane trafficking [BR:
cvn04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
111120738
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RIC1_2nd
RIC1
Beta-prop_EML_2
Motif
Other DBs
NCBI-GeneID:
111120738
NCBI-ProteinID:
XP_022317381
UniProt:
A0A8B8CSG8
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Position
2
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AA seq
1404 aa
AA seq
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MYFPLGWPKHLKNLQKGSRPLQYVISSCDRMLFAIITEDTLSIWYSKPSVQIVSYIHPHN
QIVADGTFKLVEWKPDSSMIAVLTSKLSILFFKVELDISVPNHHCLYVQHEGKNQTPKRD
INGIPDSDSIPAIRVTLLLKMQLPANITCCLCVREEIMVSTDDGYLHRIKWNASVNQKAS
FHIRGFLASLDFHQTKACKLTGEDGCVQQMEYSPIIGGYTLVLTSGKALFVIPPSTKIEN
SIPEGVWVTGLTDATCVAVNHRYRLMAFGCKSGIGAVYVINEVEGTIELSYKLQVSSKDF
PDAAQKAGPVKCMKWTPDGTAVALCWKNGGFSLWSVFGSLLLCSLGGDLYPSDSPKLFPP
PVLSMEWGLEGYQLWMVCQEEPSSNGFTEAEEESHSITNVMQLQFVKSALTVNPCLTNHE
HVFLQGEDRLYMSLSDGSQNGGSQENNNSLMSIGNKIWQIIPMSHTYLGANWPIRYAAVD
KTGHCVAVAGKTGLAHYTLTTRKWKLFGNETQEKDLVVSGGMTWWKDFICVACYNIIGQR
DEIRCYPKNTKLDNTFAVITKVPSQILLLNTFRDILIIFCIDSHIMLFNMERKNSQKNPV
MELIKIQEVSLGNYIPHPVCVTGLALTSLRTENFGSRSAHPNRDSECLLLNVAGKLLMFQ
RDEPGQQIQGKQNKAKPQSFGSPAVVATNVENMWSTSRTSQGKTQLMEALWLGCGAQGMK
VWLPLYPRHEGKTHNFMSKRIMLPFRVDIYPLAVLFEDAVILGAASDGVTYKPPCEDTKK
SVQNLPFCIVERTSQIYLHHILRQLLRRNLGVNALDLARCCTELSYFPHVLELLLHEVLE
TEATSKEPIPDPLLPRVVAFIQEFPEFLQTIVHCARKTEVALWPHLFSVVGNPKDLFEQC
MMSNELETAASYLIILQNLERPIISRQHATLLLDQSLEKRKWDLARDLVRFLKAIDPTEA
TTPPILASSRTASSKPYHSGVPSPPIMSSEADGFSFSAVSNVSNVSNANRLRSSSMTGAD
NSENVPKGSKPKLKHTFSDNIFSVKKPPAKPKEEGAPDQMYIDMILCRHCRKLLETNHLR
DMGYFSANTEDFHLVSFLKRERLKGAKVEDFVSAVKDIHHQFEWPLPILSYHVFQQLRNK
TFSTSSLASLSLLETENLPTVNVGAHNSDTEYHKYLGTLQSPSPLNLSQAMPSDVELKPQ
AFKTEESSLATTVDISDTSSLLGELDYMTESSSQDTLSPELEILSQEMANKGPHQSESEL
RYLLQILLEAGCLEWALIISLVLRDVEAVVRTVNTASMTDTPLEMVARMREGISFLELWA
DTECLGYKPFLHFIRKQIQVLGKLAEQTPPTLQLNTSIMDEQSSDSEQLSPVLQAMRMKD
PDGSPDVSPTQTRDPNKASECAVS
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
atgtatttccctcttggatggccaaaacatttgaaaaaccttcaaaaaggttcaaggcct
ttacaatatgttattagtagttgtgatcgaatgctgtttgctataattacggaggatact
ctcagtatttggtacagcaagccctcagttcaaattgtcagctacatccatcctcataat
caaattgttgcagacggcacatttaagctggtggagtggaagcccgattcctcaatgata
gcagtgttgacatcaaagcttagcatattgttcttcaaagttgaacttgacatatctgtt
ccaaaccaccattgtttgtatgttcaacatgagggaaagaaccagacgccaaagcgtgac
atcaatggcattccagacagtgacagtatccccgccattagggtcaccctcctgctcaaa
atgcagcttccggctaatatcacatgttgtttatgtgttcgagaggaaatcatggtgtcc
acagacgatggttacttacatcgcatcaagtggaatgcctcagtcaaccagaaagcctca
tttcatatacgaggctttcttgcctctctcgactttcatcaaactaaagcctgtaagctg
acaggagaagatggctgtgttcagcagatggaatacagtcccattattggaggttatacc
ctggtgctgacaagtggaaaagccttatttgtgatcccaccctcaaccaaaatagaaaac
agtatcccagagggagtctgggtgacggggctgacagatgccacctgtgtcgctgtcaat
catcgatacagactaatggcctttggatgcaagagtggaattggtgctgtgtatgtaatc
aatgaagttgaaggaacaatagaactgtcatacaaattacaagtctctagtaaagacttt
ccagatgctgcccaaaaggcaggaccagtcaagtgcatgaagtggacaccagatggcact
gctgtcgccctctgctggaaaaatggtggcttctctttatggagcgtgtttggttccctg
ttattgtgttctcttgggggcgacttgtatccaagtgatagtcctaaactgtttcctcca
cctgttttatctatggagtggggtctggaggggtaccagctgtggatggtttgtcaggag
gagcccagctccaatggcttcactgaggccgaggaagaaagccacagcatcaccaacgtc
atgcaactgcagtttgttaaaagtgccctcactgtcaatccatgcttgacaaatcatgaa
cacgtgtttctccaaggagaggacagactgtacatgagtctgagtgacggctcacagaat
ggaggctctcaggagaacaacaactcactgatgtccataggaaacaaaatctggcagatc
atccccatgtctcacacctatctgggtgcaaactggccaattagatatgcagcagtggat
aagacgggtcactgtgtagcagtggctggtaaaacaggcttggctcattacacactcact
acccgcaagtggaaactatttggcaacgaaactcaggaaaaagatttggttgtatctgga
ggaatgacgtggtggaaggatttcatctgtgtggcatgttacaatataattgggcagaga
gatgagatccgctgttatccaaagaatactaaattagataacacttttgctgtgatcaca
aaggttccgtctcagattctgctgctaaacaccttcagagatatcctcatcattttctgc
atcgattctcatataatgttattcaatatggagagaaagaattctcagaaaaatcctgtg
atggagctgatcaagatccaggaggtgtccctggggaactacattccccacccggtgtgt
gtcacaggcctggcgctcacctccctccggacagagaactttgggagccgatcagcacat
cctaacagagattcagagtgcttgttgctcaatgttgctggaaagttgctgatgttccag
agagatgaaccagggcaacagatccagggaaaacaaaacaaagccaaacctcaatccttt
ggatcgccagcagtggtagccactaatgtggagaatatgtggtccacttcccggacgagt
cagggtaaaactcagctgatggaggccctgtggctcgggtgtggggcccagggaatgaag
gtgtggttacctttgtatccaagacatgaaggaaaaactcacaactttatgtcaaagcgc
atcatgctgcccttcagggtagacatttatcctttagctgtgttgtttgaggatgcagtg
atattaggagcagcgagtgacggtgtaacttacaaacctccttgtgaagataccaaaaaa
tctgtccaaaatctgcccttctgtatcgtggagagaactagtcaaatatacctgcaccat
atactaagacagctcctgcgccgaaatttgggagtgaatgccttggatttagccagatgt
tgtacagagttatcctactttcctcatgtcctggaattgttacttcatgaagttctagaa
acagaggccacatcgaaagagcccatcccagatcctttgctgccacgagtcgttgctttc
atacaggagttcccagaattccttcaaaccatcgtacactgtgctagaaaaacagaagtt
gcattgtggccccacctgttttctgtagttggcaatcctaaagatttgtttgagcaatgt
atgatgagtaacgagctggagactgctgcctcctacctcatcatcttacagaatctggaa
cgaccaatcatcagtcggcagcatgctactttgttgttggatcaatcactagaaaagcga
aaatgggatttggctcgggatcttgttcgttttctcaaggcaatagatcccacagaagcc
accacacccccgatcctggcctcctccaggacggcatcctccaaaccctaccactccggt
gtccctagtcctcccatcatgtcctccgaggctgacggcttcagtttctccgctgtcagt
aatgtcagtaatgtaagcaatgccaacagactgcggagctccagcatgacaggggcagac
aactctgaaaatgtgccaaaagggagcaaacccaaactcaaacacactttctctgataat
atattcagtgttaaaaaaccccctgcaaagccaaaggaagagggggccccagatcaaatg
tatatagacatgattctctgtcgacattgtcgaaaactgctagagacaaatcatttgaga
gacatgggatattttagtgccaatacagaagattttcatctggtctcatttctgaaaaga
gaaaggttaaaaggagcaaaagttgaggattttgtcagtgcagtcaaagatattcatcac
cagtttgagtggccattgcccattttatcataccatgtcttccagcagcttagaaataaa
actttctccacttcaagcctggcctccctatccctgttggagacagagaacctccccacg
gtcaatgtcggggcccacaacagcgacacagagtaccacaagtacctggggacactacag
tccccctcccctctcaacctctctcaggcaatgcccagtgatgtggagttgaagcctcag
gccttcaaaactgaggagagcagcttggccaccactgtggacatctcggacaccagttca
ttgctaggggaactagattacatgactgagtcctcctcacaggacacgctgtccccagaa
ctggagatcctgtcccaggagatggcaaataaagggccccaccagtcagaatcggaactc
aggtatttgctgcaaatcttactggaggctgggtgtctggaatgggccctgattatctcc
cttgtgctgcgggatgtagaagccgtggtgagaacagttaacactgccagcatgacggac
acacctctggaaatggttgcaaggatgagggagggaatctcgttcctggagctctgggcc
gacacagagtgtctgggatataagccattcctacacttcatccgaaagcagattcaagtt
ctagggaagctagcagaacaaaccccgccaacactacagttgaatacatccatcatggat
gaacagagcagcgacagtgaacaattatctccagtgttacaggcaatgcgcatgaaggac
ccggacggttctcccgatgtaagccccacacagactcgggacccaaacaaagccagtgaa
tgtgcagtgtcctga
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