Crassostrea virginica (eastern oyster): 111120769
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Entry
111120769 CDS
T09197
Name
(RefSeq) ribonucleases P/MRP protein subunit POP1-like
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
111120769
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cvn03009
]
111120769
03016 Transfer RNA biogenesis [BR:
cvn03016
]
111120769
03029 Mitochondrial biogenesis [BR:
cvn03029
]
111120769
Enzymes [BR:
cvn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
111120769
Ribosome biogenesis [BR:
cvn03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
111120769
Transfer RNA biogenesis [BR:
cvn03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
111120769
Mitochondrial biogenesis [BR:
cvn03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
111120769
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POP1_C
POPLD
POP1_N
GCV_T
DUF3301
Motif
Other DBs
NCBI-GeneID:
111120769
NCBI-ProteinID:
XP_022317438
UniProt:
A0A8B8CNL2
LinkDB
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Position
2:complement(18170388..18175207)
Genome browser
AA seq
875 aa
AA seq
DB search
MDQFNRKRKHGGFINSQTKKQKVSDNILSQAPQAINVIEYAKCRAAELQLLDAATQKRKV
SQAVNGLMSISMRRRAMSHNVKRMPRRIREMVTIKANKHKRPSRKHRRRPKNLLQEYIRR
QKTKVWLETHIWHAKRFKMTEKWGYKIPYQPTNKSARASYRATQHHCQMIDVSYLCCIEI
LGKEENILNGISSLCNCKAGPTIGAKMCLEGTREGECVLFKQGSYPVGAIGPVTFLWRPK
SESEPFERQLWIWCHPSCYEELWKELESSFSQSENCEVQDMSVQLKCPIEGMEKGKTLSE
ITDSSVVNNNTKEENMSVDLKGMGDSVENESEKKKEIDGPKGKRKQKKGKKQASKKEESE
EQFVKVVNRKSQIGKVSMSSLKDRLVRHRFIGPESQQVLARTLNVANIMFNSNETSYWWK
EYYQDKKLSLGFNQQREFWDGVIQCQSAAELSPHVVIGLTVRDPRVFRAKIRNEFSDPDE
EINESLLSENVEALKLKISQDVSNSALWDEEIRKAVTSTKKTDFEINQLKSEHLVPGTEL
ILGEDESRIPVLIIQNPGTNPSEQNHGHYGSGWDLIMPAGWSMAFWVANIYHGARAGGLR
ELQCLANEQQSQHFPEDYPDTSAGKIEEVRIKNEKEAEHSRRPPAKRPNFNKLSMENPFS
WAWDKLFSKENGSSDFHVLRDKKDLSTLRKIMNVAKKNKKGFESGSTEEWNASIQDIMSR
HQQSLVFVKISMNSKGCPEEMGTISIPTLEDVEKMKTDRHFTGPLRHQQPDPELEKKKEK
RKAQKLLNKGLLKLLPPQKTSVEGEEEKDPDDSDRDIIGFIKHGGFSLNNGQGAGKGFCS
MAGLQKLLESIPSERNLVLIRNPRTLQYRFARLSF
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atggatcagtttaataggaaaaggaaacatggtggtttcatcaatagccagacaaagaaa
cagaaagtcagtgacaacatactctctcaagctccacaagctataaatgttattgaatat
gcgaaatgtagggcagcagaattacagcttctggatgcagccacccaaaagaggaaagtg
tcacaagcagtgaatggacttatgtctatttcaatgcgaaggagagcaatgagccacaat
gtaaaacgcatgcccagaagaatcagagagatggtgacaataaaagccaacaaacacaag
aggccaagcaggaaacatcgcagacgtccaaaaaacttacttcaggagtacatacgtcgt
cagaaaaccaaagtctggctagaaactcacatctggcatgccaaaagattcaaaatgact
gaaaaatggggctacaagattccctatcaaccaacaaataaaagtgccagagcctcttac
agagccactcagcatcactgccaaatgatagatgtctcttatctttgctgcatagaaatt
ctgggaaaagaggaaaacattctcaatggaatctcttctctgtgtaattgtaaagcaggg
ccaacaataggagccaagatgtgtttagaaggaacaagagaaggggaatgtgttttattc
aaacaaggaagctacccagttggggctatcggtccagttacatttctttggaggccaaaa
tcagagtcagagccctttgagcgacagttatggatttggtgtcatccgtcttgttacgaa
gagctgtggaaggaactggagtcgagtttttcacagtctgaaaactgtgaggtgcaggac
atgtctgtacaattaaaatgtcccattgaggggatggagaaaggaaagaccctctctgag
attacagacagttctgttgtgaacaataatacaaaagaagaaaacatgtcagttgatttg
aaaggtatgggagattcagtagagaatgagagtgaaaagaaaaaggagattgatggaccc
aagggtaagagaaagcaaaagaaaggtaaaaaacaagcttccaagaaagaggaaagtgag
gaacaatttgttaaagttgtgaacagaaaatcccagattggaaaagtctccatgagctca
cttaaagacagacttgttagacatcgttttattggtccagaatctcagcaggtgctagca
cggactctcaatgtggcgaatatcatgttcaacagcaatgaaacatcttattggtggaaa
gaatactatcaagataaaaagctgtcattaggcttcaatcagcagagggaattctgggat
ggtgtcattcagtgtcaatctgctgcagagttatctccacatgttgtgattggtttaact
gttcgagatccaagagtttttcgagcaaaaattcggaatgaattttcagacccagatgaa
gaaataaacgaatccctcttgtcagaaaatgtagaagccctcaagctaaagatcagtcaa
gatgtgtccaattcagctctctgggatgaagaaatcaggaaagctgtgacatcaacaaaa
aagacagactttgaaatcaatcagctgaagtcagaacatcttgttcctggcacagaattg
atattaggggaggacgagagcaggattccagttcttataatacagaacccaggaaccaat
ccctctgagcagaaccatggtcattatggaagtggatgggatctcatcatgccggcagga
tggagtatggccttctgggtagccaatatttatcacggggctagagcaggaggacttagg
gaattacagtgcttggccaatgagcaacagtctcaacactttcctgaggattatccagat
acttcagcggggaagatagaggaagtgagaataaagaatgaaaaagaggctgagcacagc
agacgaccaccagccaaaagacctaattttaataaattgagcatggaaaacccattttcc
tgggcatgggataagctgttttctaaagaaaatgggagttctgattttcatgtgctgaga
gacaagaaagatttgagcactctacggaaaataatgaatgtagcaaagaaaaataagaaa
ggttttgaaagtgggagcactgaagaatggaatgcttctattcaagacattatgagtaga
catcaacagtcattagtatttgtgaaaatatcaatgaattccaaaggatgtccagaggaa
atgggaacaatttccataccaacgttggaagatgtggaaaagatgaaaacagatagacat
tttactggaccgcttagacaccaacagccagacccagaactggaaaagaagaaggagaag
aggaaagctcaaaagctcctcaataaagggctattgaagcttctgccaccccaaaagaca
tcagtggaaggtgaagaggaaaaagatccagatgacagtgatcgagatatcattggattc
ataaaacatggtggattttcgctaaataacggacagggggcaggaaaagggttttgttcc
atggcagggttgcagaaacttttagaatcaatcccaagtgaaagaaatctggtactgatt
aggaaccccagaacactgcagtaccgatttgcacgactttcattttga
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