Crassostrea virginica (eastern oyster): 111120810
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Entry
111120810 CDS
T09197
Name
(RefSeq) DNA polymerase beta-like isoform X1
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
111120810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvn03400
]
111120810
Enzymes [BR:
cvn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
111120810
DNA repair and recombination proteins [BR:
cvn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
111120810
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
111120810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
HHH_8
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_5
Cdd1
HHH
NTP_transf_2
5_3_exonuc
DUF4332
Phasin
Motif
Other DBs
NCBI-GeneID:
111120810
NCBI-ProteinID:
XP_022317494
UniProt:
A0A8B8CQM6
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All DBs
Position
2:complement(26641494..26649526)
Genome browser
AA seq
373 aa
AA seq
DB search
MKTMWTRTGLFLRGTLINNNNKRRCLNLTHFELDKMSKRKNATIENPNKEFCDFLMELAN
YEKNVNRQMHKYNAYRKAVGVLAKHPTRIKSGAEAKKLDGIGEKIAKKIDEFIDTGSLKK
LEKIRADDTSVAINELTKVTGIGPAAAQKLVHEGITTIEELRKHPDKLNHHQQIGLKHFE
DFEKRIPRAEVEQIQDSAFNEIRKLDDKFEARVCGSFRRGAESSGDIDILLTNPDYTSKT
KGKTDLLHQVVKRLEKSGLITDTLSHGDFKYMGVCRVLEASPGTSKERPFRRIDIRLIPH
DQYYCALLYFTGSDIFNKNMRAHALEVGFTLNEYTLRPLGSTGTPGEPLPVTSEEDIFDY
LGMEFKQPNQRNS
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgaagactatgtggaccagaacaggattgtttctccgtggaaccctgatcaacaacaac
aacaaacgccggtgtttaaacctgacacattttgaattggacaaaatgagcaaaagaaag
aatgcaactattgaaaatccaaacaaagagttttgtgactttttgatggaattggccaac
tatgagaaaaatgtcaacagacaaatgcacaagtacaatgcttacaggaaggcggtgggg
gtgttggctaagcaccccacgcgtattaagagcggagcagaggcaaagaaattggatggg
attggtgagaagatagctaaaaagattgatgaattcatagatacaggctccctaaagaaa
ctggagaagattcgagcagatgacaccagtgtagctattaacgaactcaccaaagtgaca
ggaattggacctgctgctgcccagaaattagttcacgagggaataaccacaattgaagag
ttaaggaagcacccagataaattgaatcaccaccagcaaataggattgaaacactttgaa
gactttgaaaaaagaattcctcgcgctgaagtggaacagatccaggactcagcttttaat
gagatccggaagttggatgataaatttgaggctagagtatgtggaagcttccgcagaggt
gccgagtctagtggagatattgatattcttcttactaacccagactacacctccaaaacc
aaaggaaaaactgacctgctccatcaagttgtgaagagactggaaaagtccgggctcatc
acggatacattatctcatggagactttaagtacatgggcgtatgtagggtattagaagcc
agtcctggtacctctaaagaacgaccattcagaagaatcgatatcaggttgattcctcat
gaccagtactactgtgctcttctctactttacggggagtgacatcttcaacaagaatatg
agggcccatgccttggaggtgggattcaccctcaatgaatacacactcaggcctctcggc
agcacagggaccccaggggagccccttcctgtgacatcagaggaagacatatttgattac
ttaggaatggagttcaagcagcctaatcagaggaactcgtga
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