Crassostrea virginica (eastern oyster): 111120821
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Entry
111120821 CDS
T09197
Name
(RefSeq) LOW QUALITY PROTEIN: glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like
KO
K00731
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase [EC:
2.4.1.122
]
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn00512
Mucin type O-glycan biosynthesis
cvn00514
Other types of O-glycan biosynthesis
cvn01100
Metabolic pathways
Module
cvn_M00056
O-glycan biosynthesis, mucin type core
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
111120821
00514 Other types of O-glycan biosynthesis
111120821
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cvn01003
]
111120821
Enzymes [BR:
cvn01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.122 N-acetylgalactosaminide beta-1,3-galactosyltransferase
111120821
Glycosyltransferases [BR:
cvn01003
]
Glycan extension
Type 3 chain
111120821
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
G6PD_N
Motif
Other DBs
NCBI-GeneID:
111120821
NCBI-ProteinID:
XP_022317513
UniProt:
A0A8B8CNT8
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Position
2:12892308..12895765
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AA seq
346 aa
AA seq
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MSQMDGDLTIRNRPRVGFLFALVCTTFSLSMFFMAMNSLLYEGDVSYEGDDVLDYEEFRG
LGDPVMQDHHQHSDVNEDVAKELSKKVRLLCWVMTSPKNLDKKATAVKNTWGKRCNKLIF
FSSVTNKTFPTVGLNVSEGREHLTGKTVQAFKYCYEHYRNQFDWFLKADDDTYVIVENLR
YFLSHHSPTSLVFFGHKFSPIIKQGYFSGGAGYVLSRASLDKFTLEGIRNPFXCRQDGGA
EDAEIGRCMMKLGIAAGESLDLAGRETFHPFVPIAHLEGHHPDWFYKYSAHKPQKGLGCC
SDYSISFHYMSPSDMYLMDYLLYHLRPYGLIPQPGKGKHFSTDDYK
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaaatggacggggatctgaccattaggaacagacccagggtcggcttcctcttt
gccctagtgtgtacaacattcagcttgtccatgttttttatggccatgaacagcctcttg
tacgaaggtgatgtttcatatgaaggtgacgacgtattggactatgaagagtttcgggga
ctcggggatcccgtgatgcaggaccatcaccaacacagtgatgtaaatgaagatgtcgcc
aaggaactcagtaaaaaagttcgtctgttatgttgggtgatgacttcgcccaaaaatctg
gacaaaaaagcaactgccgtgaaaaatacatgggggaaaaggtgcaataaattaatattt
tttagtagtgtaaccaataaaacctttccaacagtaggccttaatgtttcagaaggccgc
gaacatttgaccggcaaaactgtacaggccttcaaatactgctatgaacactacagaaac
caatttgattggtttctcaaagcagatgatgacacatacgtcattgtggagaatctccga
tatttcttgtcacaccacagtcctacatccctcgtgttctttgggcataagttttcacca
attataaaacagggttattttagtggcggagcaggttacgttctgagtagagctagcctg
gacaaattcactctagaagggatccgaaatccgttcngttgcagacaagatggcggcgcg
gaggatgcagaaatcggaagatgtatgatgaagctaggtatcgccgctggagagtcgctc
gatctcgctggtagagagacatttcaccctttcgttcccatcgctcacctagaagggcat
catccggattggttctacaagtacagtgcgcataaaccccaaaagggccttggatgttgc
agtgactacagtatatcgtttcattatatgtccccctcagatatgtacctcatggattac
ctactttatcatctcagaccctacggcctgatcccccagcctggcaaaggaaaacacttc
agcacggatgactataaatag
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