Crassostrea virginica (eastern oyster): 111120885
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Entry
111120885 CDS
T09197
Name
(RefSeq) protein Tob1-like
KO
K14443
protein Tob/BTG
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111120885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvn03019
]
111120885
Messenger RNA biogenesis [BR:
cvn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111120885
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
111120885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTG
SinI
Motif
Other DBs
NCBI-GeneID:
111120885
NCBI-ProteinID:
XP_022317612
UniProt:
A0A8B8CP39
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Position
2:53399415..53403188
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AA seq
387 aa
AA seq
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MHVEVSVALNFVISYLYNKLPRRRVDMLAEALERGLKKKFQGHWYPDKPFKGSGFRCVRM
NGEKVDPVFIHAATECGLSLEEVKSYLPEELTVWIDPAEVSYRIGEKGQIKILYSDRKDE
STETADREVQAAGRTFNPDAQCFKPIDNLSASLNNLCLSPVMLSPSSPTSSKGWSASAST
SPSSSLFNSTLSRPAPPATLVSKENVVPQFTAASFAQTKFGSTKLKTNAKRPTRLSPTEM
GNYFRQRSSVLHPPASYSPQRPRSLSPRDPRYEFYMDQKNRVFLSQQQLHHQQLQQMQQQ
HLLQSPQHGGASPSSPHSDSGFMRSPMSGPGFVSGHFNDYGVQASSPLGSPANSAAVSPE
AEKSFMDGINLNNISYTAQFPHMLLAN
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtggaagtatcagtggctctgaactttgttatttcctatctatacaacaaactg
ccaaggagaagagtcgacatgctggctgaggcgttagagcgagggttaaagaaaaagttt
caaggacattggtaccccgacaaaccgttcaaaggatcaggattccggtgtgttcgaatg
aatggtgaaaaagtcgaccccgtgttcatacacgccgcgacagaatgtggtctctctctg
gaggaagtcaagtcctacctaccggaggaactgacggtctggatcgaccccgcggaggtg
tcctaccgcatcggagagaaaggtcaaattaaaattctgtacagtgaccgcaaggacgag
agtaccgagacggcggaccgagaggtgcaggcggcgggccgaacctttaaccccgatgcc
cagtgtttcaaacccattgacaatttgtctgcctccctcaacaacctgtgtctgtccccc
gtcatgttgtctccctcttcgcctacgtcatcaaaaggctggtccgccagcgcgtccacg
tcaccctccagttccctctttaactccaccctgtctagaccagcaccccccgctaccctc
gtgtcaaaagaaaacgtggtgccccaattcacggcagcctcattcgcccagacaaagttc
ggctccaccaaactgaaaaccaacgccaaaagacccacgcgtctctccccgacggaaatg
ggaaattacttccgccagcgatcgtcggttctccatccgccagccagctactctccgcag
agaccccggtccctgtccccgcgggaccctcgatacgagttctacatggaccagaagaat
cgcgtgtttctatctcagcaacagctccatcaccagcagttacaacagatgcagcagcaa
catctgctgcagtcgccgcaacatggcggcgccagtccctcctcgccccatagcgacagc
ggcttcatgaggtccccaatgtccggtccaggcttcgtttccggtcactttaacgactac
ggcgtgcaagcctcatctccgctgggatctcccgccaattccgcggccgtgtcaccggaa
gcggagaagtcgttcatggatgggattaatctgaataacatttcttacacggcacagttc
ccgcatatgttgttggctaactag
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