Crassostrea virginica (eastern oyster): 111120906
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Entry
111120906 CDS
T09197
Name
(RefSeq) regulatory-associated protein of mTOR-like isoform X1
KO
K07204
regulatory associated protein of mTOR
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04136
Autophagy - other
cvn04140
Autophagy - animal
cvn04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
111120906
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
111120906
04136 Autophagy - other
111120906
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvn04131
]
111120906
Membrane trafficking [BR:
cvn04131
]
Autophagy
Other autophagy associated proteins
mTORC1 complex
111120906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Raptor_N
WD40_Prp19
WD40_CDC20-Fz
WD40
Beta-prop_EML_2
HEAT
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
HEAT_2
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
HEAT_EZ
Cnd1
Beta-prop_TEP1_C
RTP1_C1
Motif
Other DBs
NCBI-GeneID:
111120906
NCBI-ProteinID:
XP_022317642
UniProt:
A0A8B8CPB7
LinkDB
All DBs
Position
2:25069163..25086178
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AA seq
1272 aa
AA seq
DB search
MSSELEQPFINELHEEDDEARDWDLLIAFNELRHREKIQGSKKVAQTWRMKERMKTVSVA
LVLCLNVGVDPPDVVKTSPCARLECWIDPLSSQKALEAIGANLQKQYERWQPRARYKQSL
DPTVDEVKKLCSSLRRNAKEERVLFHYNGHGVPKPTVNGEIWVFNKSYTQYIPLSVYDLQ
TWMGSPSIYVYDCSNAGIIIELFRQFSLQRESELESALNGSTPRFGSPAPAVSSVRNCIQ
LAACGASELLPMNPELPADLFTSCLTTPIRIALKWYVLQNTGRLVPNITLDLVDKVPGQL
NDRRTMLGELNWIFTAITDTIAWNTLPRELFQKLFRQDLLVASLFRNFLLAERIMRSYNC
TPMSSPRLPPTYQHPMWQAWDLALDICLRQLPTLLEDENAQFHHSPFFTEQLTAFQVWLS
YGSEKRNPPEQLPIVLQVLLSQVHRLRALDLLGRFLDLGPWAVSLALSVGIFPYVLKLLQ
SSARELRPLLVFIWAKILSVDSSCQTDLVKDNGHKYFLSVLADPYMPAEHRTMAAFVLAM
IVNDYKQGQDAALQGNVISNCLEQLSDSSASLRQWLALCLGKVWSNFDNARWCGVRDRAH
EKLYVLLNDPSPEVRASAVFALGTFISVTDRSDQANNIDLGVGMMLASVGNDGSSLVRKE
VVVALSSLVQQFESQFTNVVVQWMEEEKQKEKSAAVTGEVPGGWNLVSGTTAIQPSITNS
TGGSFTSNDSFSGESSTVRRTHSSSTLAGTTFSSVYMTVWKVLVQLALGPHKEVADMAKQ
IVNTLKLKATLSARPTHVMQNSKACYSAPSSPSNTAPIHGTPPHNQFHEEHLTPGPTMKR
DFSSPHLSGKANSYTSPHPRAKKLLSDKNSAMIHEEKEEEPRNLRQTSVTTEFFEWSCRH
FAQPLMRLSEEQDPESSSHHKREFRFLRNNNVRQDAREEQLRAGFNRLDVEVFVNKNQGI
PAVIKFHPYEGHVAVADKDGICFWDWEQGTKVNYIYNENLKNTKITAMDFINPHDESLLL
CGTDDGSVRIWRNYLSEGYDGKELVSAFQAINDLIPTVRRAGLVLDWEQESGMLLASGDV
RIIRIWDSQRETKVQDIPTGAESCVTSLASDSFGRSLLIAGCGDGTVRLFDRRLAPSECR
VMTLREHNRWVVKVHLQKGSEGKIVSASNAGDVRFWDPRFTESVRTLNLTQGVTALEIHK
HADVLACGSPNQFIGVYNTSGDNLSTIKYHEGFLGQRIGAASCLAFHPYKVKLAAGSTDS
FISVYSTPVKRS
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atgtctagtgaattagaacaaccatttataaatgagttacacgaggaagacgatgaagcg
agggattgggatttgctgattgcatttaacgagctgagacatcgtgaaaaaattcagggg
tcaaagaaggtggcacagacatggagaatgaaagaaaggatgaaaacagtgagtgtggct
ctagtgttatgtttaaatgttggagttgaccccccagatgttgtgaagacatcaccctgt
gcccgactagaatgctggattgaccccctcagctcccaaaaagccctggaagccataggg
gccaatctacaaaaacagtatgaacggtggcagcccagggctaggtataagcagagtctt
gatcccactgtggacgaagtgaagaagttgtgttcctctctcagaaggaatgctaaagaa
gaaagagtattattccattacaatggccatggtgtaccaaaacctacagtgaatggggaa
atatgggtgttcaacaagagctacacccagtacatccctttgtctgtgtatgacctccag
acatggatgggtagtccctctatctatgtgtatgattgctccaatgctggaatcattata
gagctgttcagacaattctccttacaaagagagtcagaactagagtctgcattaaatgga
tccaccccccggtttggcagtccggctcccgccgtctcatcggtcaggaactgtattcag
ttagctgcctgtggagcatcagagttactccccatgaatcctgaacttcctgctgatctt
ttcacttcctgcctcacaacaccaatcagaattgctcttaaatggtatgttctacaaaac
acggggagattagtaccaaatatcaccttggatcttgttgacaaagttcctggacagctg
aatgacagaagaaccatgctaggagaactcaactggatttttactgccatcacagacacc
attgcttggaacactctgcccagagagctgtttcagaagcttttccggcaggacttactg
gttgccagtttgtttcgtaattttctgttggcggagaggatcatgaggtcctataactgt
acccccatgtccagtccccgtctcccccccacgtaccaacaccccatgtggcaagcatgg
gatttggccctggacatttgtctgcgacagttacctaccttgctggaggatgagaatgcc
cagtttcatcacagtcccttcttcacagagcaactgactgccttccaggtgtggctgtcc
tacggatcagagaaacgaaaccccccagaacagctgccaatagtactacaggtgttgctg
agtcaggtacacagactgagggccttagatctgttagggagattcctggacctaggtccc
tgggctgtgagtctggctttgtcggttgggatttttccctatgtcttgaaacttctccag
agctctgccagagagttacgccccttattggtattcatttgggccaagatattgtctgtt
gacagttcatgtcagacagacttggtgaaagataatggccacaagtatttcctctctgtg
ttggctgatccgtacatgcccgcggagcatcgaaccatggcagcatttgtcctagccatg
attgtaaatgactacaaacaagggcaggatgcagcactgcagggcaatgtgatatcaaac
tgtctggagcagttatcggattccagcgcgtccctccggcaatggctggcactctgtctg
ggcaaggtctggtctaactttgacaatgcacgatggtgtggagtgagggacagagcccac
gagaaactgtatgtcctgctcaacgacccatccccagaggttcgagccagtgccgtgttt
gctctaggaaccttcattagtgtcacagaccgtagtgaccaagccaacaatatagacctg
ggggtagggatgatgctggcctccgtggggaatgatggaagttcgctagtcagaaaggaa
gtggtggtagccctgtcctcattggtccagcagttcgagtcccagttcactaacgtggtg
gtgcagtggatggaggaagagaaacagaaggagaagagtgccgcggtgacaggggaggtt
ccgggtgggtggaatcttgtgtcaggcaccactgccattcagccttctattactaattcg
actggaggctccttcacctccaatgacagtttctcaggggagagttcaaccgtcaggcgt
acccactccagctcaaccttggctgggaccaccttcagcagcgtatacatgaccgtgtgg
aaggttctggtccagctagccctgggtccccacaaagaggtggcagacatggctaagcag
attgtcaatactctcaaactcaaggccactttgagtgcccgccccacccatgtgatgcag
aactccaaggcttgctactctgccccctccagtccctccaatactgctcccatacacgga
acccctcctcataatcaattccatgaagagcatttgacccctggccccacaatgaagcgt
gacttttcctcccctcatctgtctggcaaggcaaactcctacactagtcctcatccgcga
gctaaaaagctgctgtcggacaaaaacagtgcaatgatccatgaagagaaagaagaggag
cccagaaatctccgtcagacctcggtgacgacagagttctttgaatggagctgtcgtcac
ttcgctcagcctttgatgcgcctgtcagaggagcaggacccagagagttcgtcccatcac
aaacgagagttccgatttctgcggaacaacaatgtccggcaagacgccagggaagaacaa
ctcagggcaggtttcaatagactggatgtggaggtgtttgtaaataaaaaccaaggaatt
cctgctgtgataaagtttcatccttatgaagggcatgtggcagtagcagacaaggatggg
atatgtttctgggactgggaacaagggactaaggttaactacatttacaatgagaatctg
aagaataccaaaataacggccatggacttcatcaacccccatgatgagtcattgcttttg
tgtgggactgatgatgggtccgtcagaatatggaggaactacctgtcagagggttatgat
gggaaggaactcgtgtccgcatttcaagcaatcaatgacctcattccaacagtcagacga
gctggtcttgtgcttgactgggagcaggaatcaggaatgttactagcctcaggggatgtc
cgcatcatccggatctgggattctcaaagagaaaccaaagtccaggatataccaacggga
gctgagagttgtgtgactagcctggcctctgactccttcggacgctcgctgttgatcgcc
ggttgtggggatggaactgtacgactgtttgacagacgactagctccatcagagtgtcgt
gttatgacgctgcgagaacataatagatgggttgttaaagttcacctgcagaaaggttct
gagggcaaaattgtcagtgcaagtaatgcgggggacgtgaggttctgggatccgcggttc
actgagtccgtgaggactctgaacctgacgcagggagttacagctctagagattcacaaa
cacgctgatgtactagcttgtggttcacctaaccagttcattggtgtgtacaacacgtca
ggagacaatctgagcaccatcaagtaccatgaggggttcctggggcagagaattggggca
gccagctgtttggcattccatccttacaaggtgaagctcgcggctggaagcacggacagc
tttatctcagtctactccaccccagtcaagcgcagctga
DBGET
integrated database retrieval system
