Crassostrea virginica (eastern oyster): 111120922
Help
Entry
111120922 CDS
T09197
Name
(RefSeq) tetratricopeptide repeat protein 30A-like isoform X1
KO
K19683
tetratricopeptide repeat protein 30
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cvn03037
]
111120922
Cilium and associated proteins [BR:
cvn03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
111120922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_2
TPR_12
ANAPC3
TPR_CcmH_CycH
TPR_1
ARM_TT21_C
TPR_6
DUF285
DUF1579
MLKL_N
DUF1266
Motif
Other DBs
NCBI-GeneID:
111120922
NCBI-ProteinID:
XP_022317679
UniProt:
A0A8B8CR52
LinkDB
All DBs
Position
2:complement(28506678..28526775)
Genome browser
AA seq
663 aa
AA seq
DB search
MTHLQLKEGEYTSTIYSLIKDQRYNDAVQLLSSQVQGHTKSRAALSLLGYCYFQMQDFVN
AADCYEGLSNMHPEIEDYKLYYAQALYKACLYQEAMKVACQIDNPQYQSQITKLQAAIKF
GEEDLPGAKSLVEQCPSDDTDTEINLGCLLYKDKMYEEACHKFTTAMQILGYQPQLSYNI
ALCHYQMKQYAPALKHIADIIERGIREHPELSVGMTTEGIDVRSVGNTLTLHETALVEAF
NLKAAIEYQLKNYYGSTNFDAACEALTDMPPRAEEELDAVTLHNQALMNMEQHPTQGFEK
LQFLLQQNPFPPETFGNLLLLYVKYEYFDLAADVLAENSHLTFKFMTPYMYDFLEAVITS
QTSKEEAYRKLEEMAKNQTETLSKLTKQVQANLGKMWEVQEARQNHDDEAVKRAVNEYDE
ALERYIPVLMQQAKIYWDMENYPHLEKIFRKSVEFCNEHDVWKLNVAHVLFMQENKYKEA
AGFYEPIVKKNYDNILSVSAIVLANLCVSYIMTSQNEEAEELMRKIEKEEEQLSYDDSEK
KIYHLCIVNLVIGTLYCAKGNYEFGISRVIKSLEPYNKKLGTDTWYYAKRCFLSLIENMA
KHMIMMKDQVVQECIQFLECCEMYGKDVKALIEQPLEAEPMHPGKNTVTYEARLLKSLLL
QLI
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgacgcatctgcaacttaaagaaggagagtacacatcgacaatatactcattgatcaaa
gaccagagatacaatgatgcagtgcaacttcttagcagtcaagttcaaggacacacaaag
tccagagcagctttgtctttgcttggatactgttacttccaaatgcaagactttgtcaat
gcagccgactgctatgaaggactgagtaatatgcatcctgagattgaagactacaagctg
tattatgctcaagctttatacaaggcatgtctataccaggaagccatgaaagttgcctgt
cagattgacaatccacaataccagagtcagataactaaattacaagcagccatcaaattt
ggtgaagaggacttacctggagcaaagagtttagtggaacaatgtccttcagatgacact
gatactgaaataaaccttggatgtctactctacaaggataagatgtatgaggaagcctgc
cacaaatttacgacagccatgcagattcttggctaccagcctcagctgtcatacaacatc
gccctgtgccactaccagatgaagcagtatgccccagccctcaagcatattgctgacatt
atagaaaggggaatcagagagcacccagagttgagtgtcggaatgacaactgaggggatc
gatgtaagaagtgtgggaaataccttgaccctgcacgagaccgctctagtggaggcattc
aacctcaaggcagccattgagtaccagctcaagaactattatggctccaccaattttgat
gcggcctgtgaggctctgaccgacatgccccctcgggcggaggaggagctcgatgctgtg
accctccacaatcaggctctgatgaacatggaacaacatcccacccagggctttgagaaa
cttcagttcttgctgcagcagaacccatttcctcctgagaccttcggcaacttgctgctg
ctctatgtcaaatacgagtattttgacttggctgctgatgtgcttgctgagaattcacac
ctgacatttaaattcatgacaccatatatgtacgacttcctggaggctgtcatcactagt
cagacatcaaaggaggaggcctacaggaaactggaggaaatggctaaaaaccagaccgag
accctcagtaaactcaccaaacaggttcaggctaatttaggaaagatgtgggaggttcag
gaggctcggcaaaaccatgatgatgaggctgtcaagagagcagtaaatgaatatgatgag
gctctagagaggtacataccggtgttgatgcaacaagccaagatttattgggacatggag
aactatccacatttggaaaaaatcttcaggaagtccgtagaattctgcaacgagcatgac
gtgtggaaactgaacgtggcgcacgtgctcttcatgcaggaaaacaagtacaaagaagcc
gcgggcttctacgaacccatcgtcaagaaaaactacgataacattctgagcgtcagtgct
attgttcttgccaatctttgtgtgtcctacattatgaccagtcaaaatgaggaggccgaa
gaactaatgaggaaaatcgaaaaggaggaagagcaattatcgtatgacgattccgagaag
aaaatctatcatctctgtatcgtcaacttagttataggaactctgtactgcgccaagggt
aactacgagttcggcatttcccgcgtgatcaaatctctggagccgtacaacaagaaactg
ggaacggacacgtggtactatgccaagagatgcttcctgtcgctgattgagaacatggcc
aaacacatgatcatgatgaaagaccaggtcgtgcaagagtgcattcagttcctggaatgt
tgtgaaatgtacgggaaggatgtgaaagccttgattgagcagccattggaagctgaacca
atgcatcctgggaaaaacacggtgacatacgaagcccgtctgctgaaaagtttactcctt
cagttgatttga
DBGET
integrated database retrieval system
