Crassostrea virginica (eastern oyster): 111120978
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Entry
111120978 CDS
T09197
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 3-like
KO
K22991
WD repeat-containing protein 45
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
111120978
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvn04131
]
111120978
Membrane trafficking [BR:
cvn04131
]
Autophagy
Other autophagy associated proteins
Others
111120978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40
WD40_Prp19
WDR55
Beta-prop_WDR35_TULP_N
BCAS3_WD40
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_RSE1_2nd
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Beta-prop_IFT140_2nd
EIF3I
WD40_RFWD3
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
111120978
NCBI-ProteinID:
XP_022317762
UniProt:
A0A8B8CPN8
LinkDB
All DBs
Position
2:complement(7381941..7391801)
Genome browser
AA seq
344 aa
AA seq
DB search
MDLSLGNSYGNGLLYAGWNQDQGCFACGMETGFRVYNADPLKEKERQDFADGGIHHIEML
FRCNYLALVGGGKNPKYPPTKVMVWDDLKKKPVIELEFSTEVRSVRLRRDRIVVVLDTLI
KVYTFTQNPQQLHVFETCPNPKGLCVLCPNSNNSLLTFPGRKTGHVQIVDLANTEKSATD
IPAHEAPLSCIAMNLPGTRLATSSEKGTLIRVFDTHSGLQLHELRRGANSAHIYCINFNQ
DSSLLCVASDHGTVHIFSTEDPKKNKQLGIGSASFLPKYFSSTWSFSKFQVPGGARCICA
FGAEPNSVIVICADGSYYRFVFNQKGECTRDVYAQFLEMTDDRS
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggacctctccctcggtaactcatacggcaatggtctgttgtatgcgggttggaaccag
gaccaaggatgttttgcttgtggaatggaaacaggttttcgggtatataatgcagatccc
ttaaaagaaaaagagagacaagattttgctgatggaggcattcatcacattgaaatgctg
ttcaggtgcaattaccttgcactggttggtgggggtaaaaatcccaaatatccacctaca
aaagtgatggtgtgggatgacctgaaaaagaagcctgtgatagagcttgagttttctaca
gaggtccgcagcgtgagactgcgacgcgatagaattgtggtggtgctggatacactcatc
aaggtgtacacatttacccagaatcctcagcagcttcatgtgtttgaaacttgccctaat
cccaaaggtctctgcgttttgtgccccaacagtaacaattccctcctgactttccctggg
aggaagactggtcatgttcagattgtggacttggccaatactgagaaatcggccaccgat
attcccgcccatgaggcccccctcagttgtatagcaatgaacctaccgggaaccagatta
gcaaccagctcagagaagggtactctaattcgtgtgtttgacactcactcagggctccag
ttacatgaactcaggagaggtgctaacagtgctcatatctattgtatcaacttcaaccaa
gattccagtcttctgtgtgtggccagtgaccacggaacggtgcacatcttctctacagag
gacccgaaaaagaacaaacagctagggatagggtctgccagcttcctacccaagtatttt
agctctacttggagtttctccaagttccaggttcccggtggagcccgctgtatctgtgcg
tttggggccgaaccaaactctgtcatagttatttgtgctgatgggagttactataggttt
gtgttcaaccagaagggggagtgtacacgggatgtgtatgcccagttcctggaaatgaca
gacgacagatcctaa
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