Crassostrea virginica (eastern oyster): 111121134
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Entry
111121134 CDS
T09197
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04137
Mitophagy - animal
cvn04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111121134
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
111121134
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvn03019
]
111121134
03009 Ribosome biogenesis [BR:
cvn03009
]
111121134
04131 Membrane trafficking [BR:
cvn04131
]
111121134
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cvn04147
]
111121134
Messenger RNA biogenesis [BR:
cvn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
111121134
Ribosome biogenesis [BR:
cvn03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
111121134
Membrane trafficking [BR:
cvn04131
]
SNARE
SNARE associated proteins
Others
111121134
Autophagy
Aggrephagy
Other aggrephagy associated proteins
111121134
Exosome [BR:
cvn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111121134
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_33
AAA_5
AAA_2
TIP49
AAA_22
NPHP3_N
AAA_14
RNA_helicase
Vps4_C
AAA_28
Mg_chelatase
Parvo_NS1
nSTAND3
AAA_17
ATPase_2
AAA_18
IstB_IS21
AAA_7
ABC_tran
DUF815
ResIII
TsaE
AAA_24
NB-ARC
Sigma54_activat
NACHT
Viral_helicase1
SLFN-g3_helicase
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
111121134
NCBI-ProteinID:
XP_022317981
UniProt:
A0A8B8CNB6
LinkDB
All DBs
Position
2:16053373..16061636
Genome browser
AA seq
799 aa
AA seq
DB search
MAEGANDDLATAILKKKDRPNRLLVEEAINEDNSVVSLSQGKMDELQLFRGDTVLLKGKR
RKDTVCIVLSDDTVGDDKIRINRCVRNNLRVRLGDVVSIQACPDVKYGKRIHVLPIDDTV
EGLTGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRGVEFKVIETDPNPYCIVAPDTVIH
CEGEPVKREEEEEALNEVGYDDIGGCRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILL
YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFI
DELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSVDGALRRFGRF
DREVDIGIPDATGRLEILRIHTKNMKLAEDVDLEQVAQETHGHVGADLAALCSEAALQQI
REKMDLIDLEDEHIDAEVLDSLAVTMEDFRWALSKSNPSALRETCVEVPNITWEDIGGLE
NVKKELQELVQYPVEHPEKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIK
GPELLTMWFGESEANVRDIFDKARSAAPCVLFFDELDSIAKARGGNAGDGGGAADRVINQ
LLTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDDKSRIAILKANLRK
SPVAKDVDLDYLAKVTHGFSGADLTEICQRACKLAIRQSIEAEIRAERERDRDPNADMEV
EDFDPVPEITRAHFEESMKFARRSVSDNDIRKYEMFAQTLQQSRGFGGNFRFPGQQSGSN
PPSQNQGGNFDDGDDDLYS
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaggagcaaatgatgatttggcaacagccattctgaaaaagaaagacaggccc
aacagattactggtagaggaggccataaatgaggataattctgtggtatctctgtctcag
ggcaaaatggatgagctgcagttgtttcgtggtgacacagttctgttgaagggcaaaaga
aggaaggatactgtttgcattgttctctctgatgacacagttggcgatgacaagatccga
attaacagatgtgtccgtaacaatctgagggtgcgtctgggagacgttgtcagtatccaa
gcctgtcctgatgtaaagtatggcaagaggattcacgtccttcctattgatgacacagtg
gagggactcacagggaatctgttcgaggtttacttgaagccctacttcctggaagcatac
agaccaatcagaaagggagatatatttttggttcgtgggggaatgagaggagtagagttc
aaggtcattgagactgaccctaatccctactgtatagtagcaccagatactgtcatccac
tgtgagggagagccagtcaagagagaggaagaagaggaggctctgaatgaagtgggttat
gatgatatcggaggctgtcgtaaacagctggctcaaatcaaagaaatggtggaactccca
ctcagacatccccagctcttcaaggccataggggtcaagcctcccagaggaatactgctg
tatggtccaccgggtacaggaaaaaccctgatagccagagctgttgccaatgaaacagga
gctttctttttccttattaatggtccggaaattatgagtaaactggctggtgaatcggag
agcaatttgaggaaagcttttgaggaggcagagaagaatgctccagctatcatcttcatt
gatgaattggatgccattgctccaaagcgtgaaaagacccatggagaagtggagagaagg
attgtttctcaactccttactttgatggatggactgaaacagagagcacatgttattgtc
atggcagccacaaacagacccaacagtgttgacggagccctgagaagatttggtcgattt
gatagagaagtagacattggaattcctgatgccactggacgtttggagatcttgagaatt
cacacaaagaacatgaagcttgcagaggatgtagatttggaacaggtggcccaggaaact
cacggacatgtgggagcagatctagctgctctttgctcagaagcagccctacaacaaatc
cgagagaagatggacctgattgatttggaagatgagcacattgatgctgaagtgctggac
tccttggctgtcacaatggaggacttcagatgggcgcttagtaagagtaaccccagtgct
ctgcgagaaacctgtgtggaggtgcccaatattacctgggaagacattggaggtctggag
aatgtcaagaaagagctccaggaattggtgcagtacccagttgagcatcctgagaagttt
ttaaagtttggcatgaccccttccaaaggagtcctcttctatggtccacctggttgtggt
aaaactttactggctaaggccattgctaatgaatgccaagccaacttcatttccatcaaa
ggcccagaactcctgactatgtggttcggagaatcagaggcaaatgtgagagacatcttt
gacaaagcccgatcagcagcaccctgtgtcttgttctttgatgagctggactccattgca
aaggcaagaggaggaaatgctggagatggaggtggagcagctgacagagtcattaaccag
ctcctgacagaaatggatggcatgggagccaagaaaaatgttttcataattggtgcaaca
aacagacctgacatcattgatcctgccatcttgagacctggccgtctagatcagctgatc
tacattcctctccctgatgataaatcaagaattgcaattcttaaagccaacctcagaaaa
tcaccagttgccaaggatgtggatttggattacttggctaaagtgacacatggattcagt
ggtgcagatttgaccgagatctgtcagcgagcctgtaagctggccatccgacaatccatc
gaagctgagatcagagcagagagagaaagagaccgcgatcctaacgccgatatggaggtg
gaggactttgatccagttccagagatcaccagggcacactttgaagagtctatgaagttc
gctcgtcggtcagtcagcgacaacgacatcagaaaatatgaaatgttcgctcaaacacta
cagcagagccgaggattcggaggaaatttcaggttccctggacaacagagtggcagtaat
cccccaagtcagaaccagggaggtaactttgatgacggcgatgatgatttgtacagttaa
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