Crassostrea virginica (eastern oyster): 111121343
Help
Entry
111121343 CDS
T09197
Name
(RefSeq) pituitary homeobox x-like isoform X1
KO
K04686
paired-like homeodomain transcription factor 2
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
111121343
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvn03000
]
111121343
Transcription factors [BR:
cvn03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
111121343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
111121343
NCBI-ProteinID:
XP_022318283
UniProt:
A0A8B8CR38
LinkDB
All DBs
Position
2:6718611..6739113
Genome browser
AA seq
311 aa
AA seq
DB search
MDTLADHLTLEEFVASASNSESNMTMHHIDTMANNSTESASLGIPTPHGGAALGSLSPSS
TDTSLDKTTEDLTKSKMDDSTSDDDKKKKRQRRQRTHFTSQQLQELEATFARNRYPDMAT
REEIAAWTNLTEARVRVWFKNRRAKWRKRERNIDTYKTGFGSQFTGLMQTPFDDSLYNGY
TNNYWAAKVPSPLGTKTFPWGLNSVNPHLSSVVSTQPMCFTNPANSISNTMVGNMPSVPT
NMSNTGAPCHYAPPAPPYIYSPNRDQCSSSIASLRLKAKQHSTSFGYPPVNHRQPTLSAC
QYATVGNSGGV
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggacactttagctgatcatttaactttagaggaattcgtggcaagtgcttctaattca
gagtctaatatgacaatgcaccacattgatactatggcaaataacagtactgaatcggct
tccctgggaatccccacccctcacggaggggcagcgctgggaagcctctcccccagctcc
acagacacctctcttgacaaaactacagaggatctgacgaaaagcaaaatggacgacagc
acatcagacgatgacaagaaaaagaagagacagaggaggcagcgaacgcacttcacaagc
cagcaacttcaagagctggaagcaacatttgcgcgcaaccgatatcccgacatggcgacc
agggaggaaattgctgcctggacaaatctcacagaagccagagtgagggtatggttcaaa
aacaggagggcaaaatggaggaaaagagaacgcaatatagacacgtacaagaccggtttt
ggctcccagttcacaggtctgatgcaaacaccatttgacgactctttgtacaatggatat
accaataactactgggcggccaaggtccccagtccccttggaaccaagactttcccctgg
ggtctgaactctgtcaatccacacctatcctcagtggtctccacacaaccaatgtgtttt
acaaacccggcaaatagtataagcaataccatggttgggaacatgcccagcgtcccgacc
aacatgtctaacaccggggccccgtgtcactacgctccccccgccccaccgtacatctac
agccccaaccgagaccagtgttcaagtagtattgcatcactaagactgaaagcgaagcaa
cattctacatcgtttggataccccccagtcaatcatcggcagcccacgctatctgcgtgt
cagtatgccacagtcggcaatagcggaggcgtgtga
DBGET
integrated database retrieval system
