Crassostrea virginica (eastern oyster): 111121376
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Entry
111121376 CDS
T09197
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23-like
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
cvn
Crassostrea virginica (eastern oyster)
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvn03021
]
111121376
Transcription machinery [BR:
cvn03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
111121376
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
111121376
NCBI-ProteinID:
XP_022318349
EnsemblRapid:
LOC111121376
UniProt:
A0A8B8CT20
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Position
2:29748247..29763457
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AA seq
1351 aa
AA seq
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MAQKSIEDTITDVVKDILRGEAIEEALCSVILHTEESLQWRREHCFNSLKAELANVPQEN
LDTALKCYITQIYNVQNASRVELLLDLLESLVENSIVPAKPICDGLLDHELLSYSASLMW
TKTFQLMRKIIGGVDYKGCRDLLRGILEKCQEIKEKENVSVMPDIDTAVNLVAHILDRNV
CLLPAYLAVNEINKVCPEDRKWPHWKMGNILANFVHSFRPAAQMVTVSGRTHLLPVVGYS
IAISTSNVWRLSSTCLKFPLNGPLPYDKELSEPQTGLLRYVLEQPYSRDMVCNMLGLNKQ
VKQRCEVLEEQLVDLVVMAMERSENDDASNDECLSQLLWQHLSSQVIYFVLFQFASFPHM
VMSLYEKLKGRNLNKGRDHLMWVLLQFISGSIQKNPLKEFLPVMKLYDLLYPDKGTIAMP
DVAKAQSTHGVAATCIWIHLNKKAQTDTIKLPRPIPHALQEHCEFLKQSLNNKNLSLNDY
KIALLCNAYSTNNDYFNLPMGKLVESIYGDSKHTTLLPGNIVASAPTQPLAMSLLDSLTV
HAKMSLIHSIVHRVIKQAKSKATIAQSPALIETYSRLLVYMEIESLGIKGFISQLLPTVF
THTAWGILHTLLEMFSYRLHHTQPHYRIQLLSHLHHLSQSAQTNQNQLQLCMESTALRLI
TGLGSFEVQPQLSRIFNEPGRPGFLSNESEELNRALVLTIARAMHVTGVDSFSSTWPREI
LNQIMANTPHNWSPNTLANFPPSLAEFFQSQPQHRDDKNTLKRNVEAEYKKWKTMANEND
IIAHFSMQGSSTVFLCIIWKTLLEENRGITPIAYKVLDRLGPRAVSSHLRTFADYIVSEL
NPNSAGGQHYHKAIDSLNEMVWRYNIVTIDRLILCLALRNVDEDARLCYLLIHMLLLKPQ
DFKSRVQEFVKENSPEHWLQNNWHEKHMAFHRKYPEKFYFEGIQDLNSPIQHQYLPVYFG
NVCLRFLPVLDILLHRILEQPSLTSSNLNLFEKILESLGVLYKFHDHPITYLYNTLHYYH
KILVQRAAYKRRLVTTIWNAHHEIRPNSWFLTEDYQRFSMEENLEWTPDLDYYVRIIGRL
VDTIDGKSPFPNCDWRFNEFPGPAAHALYVTCVELMALPVPGSVVGNALLDVVMKSSTQL
QRGKVMSWMNAVGLVLTALPETYWISLNNRIVETLCSLPLTVQGGCQPFQVFNFTTSQTV
FAEQHMTYLLALSHAVWHHAGIGQLSQLSGFLREHLKPVVKTEEQFLYVCHLVGPFLQRL
HSERTKSLMELVVELYEILVNVDKTCDHLRYLDPITDFLYHIKYMFVGDSVKHEIEKIIR
NFRPALTLRLRFISHIQLEEAMTPLAPPMST
NT seq
4056 nt
NT seq
+upstream
nt +downstream
nt
atggcccaaaaatcgattgaagacacaattactgatgtcgtaaaagatattctgcgtggg
gaggcaatagaagaagccctttgctctgttatcttacacacagaagaatctttacaatgg
agacgagaacactgcttcaacagcctgaaagcagaactggctaatgttcctcaggagaac
ttggatacagcactgaagtgctacataacacagatctacaacgtgcagaatgccagtcga
gtggaactcctgctggacctactggagagtctggtggagaacagcatcgttcccgccaag
ccaatttgtgatggactcttagaccatgaactgctcagctacagtgccagtcttatgtgg
accaagacatttcagttgatgaggaaaatcataggaggtgttgattacaaaggatgcaga
gatctgcttcgtgggatacttgagaaatgtcaagaaataaaggaaaaggagaatgtgtca
gtcatgccggatatagacacagcagtcaatttggtggcccacattctggaccggaatgtt
tgtttgttaccggcgtacctagctgtgaatgaaattaacaaggtgtgtcctgaggacagg
aagtggccccactggaaaatgggtaacatcctagcaaactttgttcacagttttcggcct
gctgcccagatggttactgtttctggccgaactcaccttttgccagtagtcgggtattcc
attgcgatctccaccagtaatgtctggcgcctcagctcaacctgtctgaagtttcctctc
aacggacccctgccttatgacaaggagctatcagagccccagacaggactgttgaggtat
gtgctggagcagccttactcccgggacatggtctgcaacatgctgggtctcaacaaacag
gtgaagcaaaggtgtgaagttttggaggaacaattggttgacctggttgtcatggcaatg
gagaggtcagaaaatgatgatgcctccaatgatgaatgcctgagccagttgctatggcaa
catttgtccagccaggtcatttactttgtgctgtttcagtttgccagtttccctcacatg
gtgatgtccctttacgagaaactgaagggtcggaacttgaataagggaagagatcacctg
atgtgggtactcctacaattcatatcgggcagcattcagaaaaatccactgaaggagttc
ctaccagtgatgaagctgtatgacttgttatacccagacaaaggaacgatcgcgatgcca
gatgtagctaaggctcagtccactcacggagtggctgccacctgtatctggatccacctc
aacaaaaaagcccagacagacactatcaaactaccccgccccatcccccacgccctgcaa
gaacactgcgaattcctgaagcagagtttgaacaacaagaacctgtctctcaatgactac
aagatagctttactctgtaatgcttatagcacaaataatgactacttcaacttgccaatg
ggtaaattggtggagagtatctatggggacagtaaacacaccactctgttgccaggcaac
attgtggcatcagcacccactcaacctcttgccatgagtttgttggattcccttacagtt
catgcaaaaatgagcttgatccacagtatagtccacagagtaatcaagcaggccaagtcc
aaggctacgatcgctcagtcccccgcgttgattgagacatacagtcgtctcttggtctac
atggagattgaatctctcggaatcaaaggattcatcagtcagttactgccaactgtgttc
acccacactgcctggggcatcctgcacaccctgctggagatgttcagctaccgcctgcac
cacacacaaccacactaccgcatacagcttctgagtcatctacatcatttaagtcagtca
gcccaaaccaaccagaaccagttacagctgtgtatggagagcacagcccttagactgatt
acaggtcttgggagttttgaggttcagcctcagttgtccaggatattcaatgaaccaggc
cgcccagggttcttatcaaatgagtcagaggaactgaacagggccttagtgctcaccatc
gcacgagccatgcatgtcacaggtgtggacagtttttcgtcaacttggccgcgggagatc
ctgaatcagattatggccaacactccccacaactggtcccccaacaccctggccaacttc
cccccgagtctggccgagttcttccagtcccagcctcagcaccgggacgacaaaaacacg
ctcaaacggaacgttgaggcagagtacaaaaagtggaaaactatggcaaatgagaacgac
atcatagcccacttctccatgcaaggatcctccaccgtgtttttgtgtataatatggaaa
actttgttggaggaaaacagaggaataactccaatagcttacaaagtgttggatcgcctc
ggtcctcgtgcagtgtcttcacatcttcgaacttttgccgattacattgtgtcagaactc
aatcccaattctgcaggtggacaacactaccacaaggccatcgactcgttaaatgagatg
gtgtggcggtacaacattgtcaccattgatcggctcattctgtgtctggctctgagaaat
gtagatgaggatgccagattatgctacctcctgatacacatgctgctcttgaaaccacaa
gacttcaagtcccgggtccaggaatttgtcaaagagaattctcccgagcactggctccag
aacaattggcatgaaaaacacatggctttccatcggaaatatccagagaagttttacttt
gagggaattcaggacttgaacagtcccattcagcaccagtatctgcctgtctacttcggc
aatgtttgtctgcgatttttaccggtgcttgacatcttgttacatcggattctggaacaa
ccatccttgacaagcagtaatttgaacttatttgagaaaattctggagagtctgggtgtt
ctttacaaattccatgatcaccccatcacctacctgtacaatactctccattactaccac
aagatcctcgtccagcgagctgcatacaaacgtcgactggtcaccaccatatggaatgct
caccatgagatccggcccaacagctggttcctgacggaggactaccaaaggttctccatg
gaggagaatctggaatggacccccgatctggattactatgtacggatcattggcagactt
gtggacactattgatggtaagagtccattccccaactgcgactggaggtttaacgagttt
ccggggccagcagctcatgctctgtacgtgacctgtgtggagttgatggccctacctgtc
cctgggagtgtggttgggaatgccctgctggacgtggtgatgaaaagttccacacaacta
cagaggggcaaggtcatgtcctggatgaatgcagtgggactggtcctcactgccttgcca
gagacctactggatttctttgaacaacagaattgtggagactctttgcagcctacctcta
acagtccagggaggatgtcagccattccaggtgttcaacttcaccaccagccagaccgtg
tttgctgagcaacacatgacttacttactggctctgtctcatgctgtctggcaccatgcc
gggataggacaactatctcaactcagcgggtttctgcgggagcacctgaagccagtggtc
aagacagaggagcagttcctgtatgtgtgtcatctggtcggacctttcttacagaggctt
cactctgaaaggacgaaaagtctgatggagttggttgtggagctgtatgagatcttggtc
aatgtggacaaaacatgtgaccatttgcgataccttgatcccatcacagattttctatac
cacatcaagtacatgtttgtcggggacagtgttaaacatgagatcgagaagatcatccgt
aacttccggccggccctgaccctgagacttaggttcatctctcacatccagctggaggag
gccatgaccccactggccccgcccatgtccacatga
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