Crassostrea virginica (eastern oyster): 111121443
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Entry
111121443 CDS
T09197
Name
(RefSeq) LOW QUALITY PROTEIN: cell division cycle protein 20 homolog
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111121443
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvn04121
]
111121443
03036 Chromosome and associated proteins [BR:
cvn03036
]
111121443
Ubiquitin system [BR:
cvn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
111121443
Chromosome and associated proteins [BR:
cvn03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
111121443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_Nup120_160
NBCH_WD40
Beta-prop_RIG_1st
KNTC1_N
Ge1_WD40
PROPPIN
DUF1513
Motif
Other DBs
NCBI-GeneID:
111121443
NCBI-ProteinID:
XP_022318440
UniProt:
A0A8B8CRT0
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Position
2:complement(43271310..43276383)
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AA seq
507 aa
AA seq
DB search
MAINKGPSMRFEXKAECNQSVNSSLNVSTTAKTPMKNLNRSVNNPKTPSNAKTPKSSNQA
RTPGGSKAPKTPSGGDRFIPNRSATQFELGHFKITTDSASGGETDNLLSPSQKEYQKVMS
ENLNGTDISSNKIISYKTKAPSAPEGYQNNLRVLYSSCKTPASSVKKTIRHIPQVPERIL
DAPDILDDYYLNLLDWSCNNLLAVCLGGSVYLWNAASGEIDQLLQMESSDQYVGAVAWIK
EGNYLALGTSNGEVQLWDVAAKKRLRNMAGHANRVGALSWNSYVLSSGSRSGAIHHHDVR
VAEHHVGTLLGHTQEVCGLKWSPDGKFLASGGNDNLLNIWGAQAGSPLSEETPLHTFSQH
QAAVKALAWCPWQPHLLASGGGTADRHIRFWNCSTGQCVDSVDTKSQVCALLWCKHYKEL
ISSHGFALNQLTIWKYPTMTKVSELSGHTARVLHMAMSPDCQTVVSAGADETLRIWKCFT
LDEQKKAAQKSAVTKDKKSVFSMTSIR
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggccattaacaagggaccaagcatgcgctttgagnagaaggcagaatgtaatcagtcc
gtcaacagctcacttaatgtaagcacaacagccaaaacaccaatgaagaatctgaaccga
tcagtcaacaacccaaagaccccttcaaatgccaagacacctaagtcatcaaatcaagca
aggacaccaggaggatctaaagcacctaaaacacccagtggtggagacagattcattcca
aatcgaagtgctacacagtttgagcttggacattttaagattacaactgacagtgctagt
gggggcgagacagacaatttgttaagtccttcacaaaaggagtatcagaaagtgatgagt
gaaaacctcaatggaacagacatttccagcaataagattatatcatacaagacaaaggca
cccagtgcgcctgaaggataccaaaacaaccttcgagtattgtacagttcatgcaaaacg
cctgccagttcagtaaagaagacaatacgtcacattcctcaagttccagagcgcatcctt
gatgctccagacatccttgatgattattacctgaacctgctcgactggtcatgtaacaat
ctcctggcggtgtgcctgggtggcagtgtgtacctgtggaatgccgcctcaggggagatc
gaccagctgcttcagatggagagctcggaccagtacgtgggagcggtggcctggatcaag
gagggaaattatctggccctgggcaccagtaatggggaagtgcagttatgggatgtggct
gccaagaaaagattacgcaatatggcaggtcatgccaacagagttggggctttgtcctgg
aattcatatgtattaagcagtggatcccgtagtggagctattcaccatcatgatgtgcga
gtggctgagcaccatgtgggtacattactgggtcacacccaggaggtctgcggcctgaag
tggtccccagacgggaagttcctggccagtggaggaaatgacaacctgctgaacatctgg
ggggcccaggccggtagtcctctctctgaggaaacaccactgcacacattttcccaacat
caggcagcagtcaaggctctagcctggtgcccttggcagccccacctgttggctagtggg
ggaggaactgcggaccgacacatccgattctggaactgcagtaccggacaatgtgttgac
agtgtggataccaagtcacaggtgtgtgccctcttgtggtgtaagcactacaaagaactt
atctctagtcatggttttgctctcaatcagttgaccatctggaagtaccctacaatgacc
aaggtgtccgagttatcaggtcatactgctagggtgttacacatggcaatgtcacctgac
tgtcaaacggtggtatcagctggagcggatgaaacactacgaatctggaaatgttttaca
ctggacgagcagaagaaggctgcacagaaatcggccgtcaccaaggacaagaaaagtgtg
ttctccatgacctctataagatag
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