Crassostrea virginica (eastern oyster): 111121480
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Entry
111121480 CDS
T09197
Name
(RefSeq) ribosome biogenesis protein BMS1 homolog
KO
K14569
ribosome biogenesis protein BMS1
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
111121480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cvn03009
]
111121480
Ribosome biogenesis [BR:
cvn03009
]
Eukaryotic type
90S particles
GTPase
111121480
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
GTP_EFTU
Tsr1_G-like
MMR_HSR1
DO-GTPase2
ABC_tran
AAA_22
FeoB_N
RNA_helicase
AAA
Motif
Other DBs
NCBI-GeneID:
111121480
NCBI-ProteinID:
XP_022318488
UniProt:
A0A8B8CRN9
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All DBs
Position
2:complement(43749351..43765465)
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AA seq
1212 aa
AA seq
DB search
MEEDGNQKKHRKRQAGPKAEKKKAKSKHQQELTPQQRNPKAFAIQHAQKTAKLIRRTQDI
KTKKQHIPIVDRTPLEPPPIVVAIVGPPKVGKSTLLQCIVKNFTKQRLANVQGPVTVVSG
KTRRLTLVECNNDINSMIDLAKVADLVLLLVDASFGFEMETFEFLNICQVHGFPKIMGVL
THLDAFKDNKQMRKTKKRLKHRFWTEVYQGAKLFYLSGMVNEEYQKTEVHNLCRFISVMK
FRPLQWRLTHPYIVVDRIEDITDPETIRQKPKCDRKMSMYGYVRGTHLKNHSMIHLPGCG
DYTISDMQSLPDPCPMPDKEKKKTLHVKERLIYAPMSGVGGVIYDKDAVYIDLGGSHSLK
QNEEENEAPMNELVASLMNVNNPLDQKMTTSQMTLFSNTAPITEADVQEDDEDDDEDEDE
DSARVRRSAEFNATTNEKQGKQTEDLVFDDSDDEDDDEPFNLFSNSMKKQTVSNSDRKKK
TDENKDTESNSDSNSDSDSEEDELASKKPKLSRTSKSSDSSVTGAKVTPSQKGKSVNTNI
SPDGISDYSDSEMEDSGMEEDDDELEGEESGEEEEEDDSGEDDSEEEREEDEDEGNLKWK
TNIAAAAAESFKRRQTERINYRKLIYGTAEVEDKEEDEEDELGGLFKVLKKKDEKNNPQS
SANLTDSSKCVPDTLQNWELEEIQDLIRDCFVTGEWDKSEDAKARLEQDDELFGDFEDLE
TGEVHHGEGEDDDEDDNNNEEDDDGDEPTERKKTKAEKTATERRMEKKKKLKELFDNEYD
MKGDNEFYDSWKQANEEQAKLNRAEFENMEDSLRVGYEGFRPGMYVRVEMDRLPCELINN
FDPSYPLLLGGQQSVEGNIGYVQTRIKKHRWYKKILKSRNPLIISLGWRRFQSIPLYSIQ
DHNMRNRLLKYTPQHLHCHASFWGPITPQGTGLLAVESLTGNEPGFRIAATGVVLELDKS
MQIVKKLKLTGTPYKIFKKTAFIQGMFNSILEVTKFEGAKIRTVSGLRGQVKKALRTPEG
AFRATFEDKILLSDIVFMRTWYPVEVPQFYATVTSLLLPPAEKAAWTGMKTLGQLKRERG
ITAPMKEDSQYKPVERKKRYEPTLKIPKDLQKMLPFKDTPKVLKEKGDPYKRVAVILEPH
EAKVNKMMKMVKNLYHHKLKSDKMRMRERVSKHQKEMDRIGVLKSRKQKQVKKDIYRALG
KLQKKNEKYKKD
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagacggaaatcagaagaaacatcgcaagcgtcaggcaggcccaaaggctgag
aagaaaaaggccaagagtaaacatcagcaggagttaactccccaacagagaaaccctaaa
gcttttgctattcagcatgctcaaaaaacagccaaacttatccgaagaacacaagacata
aaaactaagaagcagcacatccctattgtggacaggacaccactagaaccaccaccaatt
gtggtagccattgtagggccacctaaagtgggcaagtccaccctgctccaatgtattgta
aaaaatttcaccaagcagcgccttgctaatgttcaggggccagtcactgttgtatcaggt
aaaacaagaagattaactcttgtggaatgtaacaatgatataaacagcatgatagacttg
gccaaagtggcagacttggtactgctgttggtggatgccagttttggttttgagatggag
acatttgagttcctcaatatttgtcaagttcatgggtttcctaaaataatgggcgtgttg
actcaccttgatgctttcaaggacaacaaacagatgaggaaaaccaagaagaggctgaaa
caccgattctggacagaggtctatcagggtgctaaattattctacctgtctgggatggtg
aacgaggagtatcagaaaacagaggtgcacaacctgtgtcgcttcatatctgtcatgaag
tttcgacccctgcagtggagattgactcatccctatatagttgtagatagaattgaagac
ataactgatccggaaaccattagacagaagccaaaatgtgacaggaaaatgtccatgtat
ggctatgtgagaggaacacacctaaagaaccactccatgattcaccttccaggctgtggg
gattacaccatcagtgacatgcagagcttgcctgacccctgcccaatgccagataaggag
aagaagaaaaccctccatgtcaaagagagactgatctacgcccccatgtcaggggtcgga
ggggtcatctatgacaaggatgctgtgtatattgacctcggaggcagtcactccctgaag
caaaatgaagaggaaaatgaagccccgatgaatgaactggtggcctccttgatgaatgtg
aacaatcctttggaccagaaaatgaccaccagtcaaatgaccttgttttctaacactgca
ccaatcacagaggcagatgtacaagaggatgatgaagatgatgatgaggatgaggatgaa
gatagtgcaagggttcggaggtcagcagagtttaatgccacaaccaatgaaaaacaagga
aagcaaacagaggacttggtatttgatgacagtgatgatgaagatgatgatgagcccttc
aatctgttttcaaattccatgaaaaaacaaactgtgtcaaattctgatcgaaagaaaaag
acagatgaaaataaagatacggaatctaattctgactcaaatagtgattctgattcagag
gaggacgaattagcatccaaaaaacctaagttgtcaaggacttctaaatccagtgattcc
tcagtaactggtgctaaagtgactccttcacaaaaagggaaaagtgtcaacactaatata
tctcctgatgggatatctgactattctgacagtgaaatggaagacagtggtatggaagaa
gatgacgatgaacttgaaggtgaagaaagtggtgaagaggaggaagaagatgatagtgga
gaggatgatagtgaagaagaaagagaagaggatgaggacgaaggaaatttgaagtggaag
accaacattgctgctgcagctgccgaatcattcaagaggagacagacagagagaattaac
tacaggaagcttatatatggcacagctgaggtggaagacaaggaggaagatgaggaggac
gagttgggaggactgtttaaggtgctgaaaaagaaagatgagaagaacaacccccagtct
tcagccaacttgactgatagctccaagtgtgtgccagatacactccaaaactgggaacta
gaggagatccaggatttaatccgagattgctttgtgaccggagagtgggacaaaagcgag
gatgcaaaagctcgactagaacaagatgatgaattgtttggagactttgaggatctagaa
actggagaggttcaccatggtgagggagaagatgatgatgaagatgataataacaatgag
gaggatgatgatggagatgaacctacagagaggaaaaagaccaaggctgagaaaacagcc
acagaacgaaggatggagaagaagaaaaagctgaaggaattgtttgacaatgaatatgac
atgaagggggataatgaattctatgacagctggaaacaagcaaacgaagaacaagccaag
ttgaaccgagcagagtttgagaacatggaggacagtttacgagtgggttacgagggattt
aggccggggatgtacgtcagagtagaaatggacagactcccctgtgaacttatcaataac
tttgacccctcttatccccttttactggggggtcaacagagtgtagagggaaacattgga
tatgtacagactcggattaagaaacacagatggtacaagaagattctgaaaagtcgcaat
cctctgattatctcccttgggtggcggaggtttcagtccattccactgtattccatccaa
gaccataacatgcggaatagactcctgaagtacaccccccaacatctccactgccatgcc
agcttctggggtcccatcacgccccaagggacagggttactggctgtggagagtctcaca
ggaaatgagcctggctttaggattgctgccacgggcgtagttctggagttagacaaatcc
atgcagattgttaagaaactgaaactcaccggcacaccatacaaaatcttcaagaaaact
gcatttattcaggggatgttcaattccatattagaggtcacaaagtttgaaggggccaaa
attcgcactgtgagtgggctgcgaggacaagtgaagaaggctctgaggacccctgagggg
gcgttcagagctacatttgaggacaagatccttcttagtgatattgtgttcatgagaact
tggtaccctgtggaggtgccccagttttatgccactgttacctcccttctgcttccccct
gcggagaaggcagcctggacagggatgaagaccctggggcagctaaagagggaaaggggg
ataactgctcccatgaaggaggactctcagtataagcctgttgaaaggaagaaaagatat
gagcctacactgaaaataccaaaggatctccagaagatgttgcctttcaaagacacaccc
aaagtactcaaagagaaaggggatccttataagagggtagcagtgatacttgagccccat
gaagctaaggttaacaaaatgatgaaaatggtgaaaaacttgtatcaccacaagttaaaa
tcagacaagatgagaatgagggagagagtgtccaaacaccaaaaggagatggatcgcata
ggtgtcctcaagagtagaaagcaaaaacaggtcaagaaggatatttatagggcactggga
aagttacagaagaaaaatgagaaatacaagaaagactga
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