Crassostrea virginica (eastern oyster): 111121590
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Entry
111121590 CDS
T09197
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit-like isoform X1
Organism
cvn
Crassostrea virginica (eastern oyster)
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Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Death
Ank_KRIT1
Death_EDAR
Motif
Other DBs
NCBI-GeneID:
111121590
NCBI-ProteinID:
XP_022318640
UniProt:
A0A8B8CSD2
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Position
2
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AA seq
1116 aa
AA seq
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MEHDDSSDSNEIAMMKMDNGGMVPELYNHHSDEPYIEIVEQPQARGFRFRYECEGPSHGG
LQGEKSEKYRKTFPSIRIRNYNGAARIVVTLVTNENIPKPHAHKLVGKNCNDGSCVVEQK
ANQNTVTFPNLCIQHVTRRKASEVIEYRILESMKLDKQVKLGNLNMQTDLSDDEKSQACS
QAKQLAKDMQLNVVKLCFQAYLRDDSGKVCNLLPPVLSTAIYDSKAPGANALKICRMDKY
GGCCTGNEEVFLLCERVQKDDIQVRFVEQDDDGKTVWEAFGNFGPFDVHRQYAIVFKTPA
YRNPNIDRPVSVIIMLQRKSDTETSEPKSFTYFPQSFDKDEIAKKRKKTLPSYPGSNGFG
GGGGGGEDGRPNLNSFHNGGLPFAPPQGNIPVMVNDSEQSLSNDSLHNPSPPPKISNATK
RRINKAKRQGLKPGNVEIDGGRIQALPTFIGENAALQVAGPPEIHVTTANFQPNHGISLQ
PFSQLAPQNYPSHVFVPRGGGGVAASVRDASNDTSSSSSGMDEVDARLCDKPQTLPPPTG
SDSVVLRKDLMMPQDGSPDSGMEAPDDIESDGHVSVQNVLKIETCVTDTVDVTEKTAGLT
LTESVCAVEECTVTDSVEARPVNAGENTHSETCDQSVQTDKDEVMRMTERTVKALQSYAS
TGDIRQLLLVQRYLTSVPDQNGDIPLHTAIINGNMEVVNNLLDVMQTMPNLWLKINAYNN
LLQTPLHLAVLTGQEDIIDRLLCAGANTKLPDRNGNNPAHLAVLTGNTSCLAKLLKYQRP
FSTPKNPFPELNMKNFDGFAPAHIAAQKKNLQAIKLLVRCKAEINMTDGKSGKTPLHYAV
EENDLSVSSYLILEAGATVDAVCFNGNTALHIACGQQNSGMVALLMAAGANPEIENSEAL
KTDAGSEDEEDGEGDKAVPGHKPCHYAAGNTRILKILNGEPYGLESVGGLKTVSGRSEFY
LEANSLLASEDFQPNPLQDPSLHSSLTHTPSITAVLFDDDGDIEKISYPVRVQLSKFLDP
PQSGRDWVALSERLGLRQSVEGNHGGFSPTRLLLNFYESCGGTVSKLLEALVAMERYDAV
ELINSALSIQTDDCKRQAIRRDLPGGQPEGHLQVTH
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atggaacatgatgattcctcagactctaatgagatagccatgatgaagatggacaatggt
ggaatggtgccggagttgtacaaccaccattcagacgagccctacattgagattgttgag
cagccccaggcccgggggtttcggttccggtacgagtgtgagggaccttcccatggcggc
ttacaaggggagaagagtgaaaagtacagaaagaccttcccctccatcaggataaggaat
tacaatggcgctgcccgaattgtggttaccctagtcaccaatgaaaacattcccaaaccc
cacgcacacaagctggtgggcaagaattgtaacgatgggtcgtgtgtggtggagcagaaa
gccaatcaaaacacagtcacgtttcctaacttgtgtatccagcatgtaacaaggaggaaa
gccagtgaggtgatcgagtaccgaattctggagtccatgaagctggacaaacaggtcaag
ctgggaaacctcaatatgcagaccgacctctcagatgatgaaaaatcccaggcctgcagt
caggccaagcagctggcaaaggacatgcagcttaatgtagtgaagctgtgcttccaggcc
tatctccgtgatgacagtgggaaggtgtgtaacctcctgcctcctgttctgtccactgcc
atctacgacagcaaggcaccaggagctaatgccttgaagatctgtcgcatggacaaatac
ggtggatgttgcacaggaaatgaagaggtcttcttgttgtgtgaaagagtgcagaaagat
gacatacaagttcgctttgtagagcaggatgatgatggcaaaacagtgtgggaggcattt
gggaactttggtccatttgatgttcatagacagtatgccattgtgtttaaaactccagcc
tacagaaacccaaatattgacaggccggtgtccgtgatcatcatgttacagaggaaatcg
gatacggagaccagtgaacccaaatccttcacatacttcccacagtcctttgacaaggat
gagattgctaagaagaggaagaagaccctcccaagctacccagggagcaacggcttcggg
ggtgggggaggagggggagaggatggacgaccaaacctcaacagcttccacaatggaggg
ttaccatttgctccaccccagggaaatatacctgtaatggttaacgattcagagcaatct
ttgtccaatgacagtcttcacaatccatcacctcctccaaagatttcaaacgctacgaag
agaaggataaataaagcgaaaagacagggcctcaaaccaggaaacgtagagatagacgga
ggtcgaattcaagctctcccaaccttcattggtgaaaacgcagcgttgcaagtagcagga
cctccagaaattcacgtaaccacagccaactttcagcctaatcacggaatcagtcttcag
ccctttagtcaactcgcacctcagaattatccatctcacgtatttgttccacgaggtggc
gggggcgttgcagccagtgtgagagacgcctcgaatgacacctcctcctcctcctcaggg
atggatgaagtggacgccagactgtgcgacaagccccagaccttgcctccccccacaggt
tcggactccgtggttctccgtaaagatctcatgatgcctcaggatgggagcccggactct
ggtatggaggcccccgacgacattgaaagcgacggacatgtgtcggtccaaaatgttcta
aaaatagagacatgtgtgacggacacagtagacgtcacagagaaaacagcaggattgacg
ctgactgagtctgtgtgtgctgtggaggaatgtactgtgactgatagtgtggaggctagg
ccagtcaatgcaggagaaaacacccactctgaaacatgtgatcaaagtgtccagacagac
aaggatgaagtgatgcggatgacggagagaacggttaaggccctgcagagctatgcctcc
accggagacatccgacaattgctgcttgtccagcgctacctcacctcagtaccggaccag
aacggggacatccctctacacactgccatcatcaatgggaacatggaggtagtgaacaat
ttgctggatgtgatgcaaaccatgcccaacctctggctgaagataaacgcctacaacaac
ttgttacagacccccctccacctggctgtactgacaggtcaggaagacatcattgaccgc
ttgctgtgtgctggcgccaacacaaaactaccggacagaaacggcaacaaccccgcccac
ctggcagtgctgaccggcaacaccagctgtctcgcaaagctcctcaaataccaacgacca
ttctccacccccaaaaacccattcccagagctcaacatgaaaaactttgatggatttgca
ccggcccatatcgcagcacagaagaaaaatctccaagccattaagttactggtgcggtgc
aaggcagaaatcaacatgactgatggtaaaagtggtaaaacaccgctccactatgctgtg
gaggaaaacgatttgtctgtcagtagctacctcattctggaagctggtgcaactgtggat
gccgtctgctttaatgggaatacagctttacacatagcctgtggccagcagaacagtgga
atggtagccctgttaatggctgcaggagccaacccagagatcgagaactcggaagctctg
aagactgatgcgggcagtgaggatgaggaggatggggagggagacaaagcggtcccggga
cacaagccctgccactacgcagcaggaaacaccagaatactgaagattctgaatggcgag
ccttacggcctggagtcagtgggcggcctgaagactgtcagtgggaggagtgagttctac
cttgaggccaacagtctcctggcgtcggaggacttccagccaaaccccctccaggacccc
tccctgcactcctccctcacccacacaccctcaatcacagcggtcctcttcgatgatgat
ggagacattgagaagatcagttaccctgtgcgtgtgcagttgtccaagttcctggatccc
ccccagagtggacgggactgggtggcgctgtcggagagactgggacttcgtcagtctgtg
gaggggaaccacgggggattcagccccaccagacttctcctgaacttctacgagtcatgt
ggtggcactgtatccaagctgttggaggctttggttgctatggagagatacgatgctgta
gaattgatcaactcagctctaagcatacaaacagatgactgtaaaaggcaagcaatcaga
agagatctccctgggggtcaacctgaaggtcatttacaagtcacccattaa
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