Crassostrea virginica (eastern oyster): 111121591
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Entry
111121591 CDS
T09197
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 1-like
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
cvn01100
Metabolic pathways
Module
cvn_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
111121591
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cvn01003
]
111121591
Enzymes [BR:
cvn01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
111121591
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
111121591
Glycosyltransferases [BR:
cvn01003
]
Glycan extension
O-Glycan
111121591
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
HAUS-augmin3
CYP38_PsbQ-like
FapA
DUF3450
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
111121591
NCBI-ProteinID:
XP_022318643
EnsemblRapid:
LOC111121591
UniProt:
A0A8B8CS50
LinkDB
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Position
2:complement(52902509..52912501)
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AA seq
507 aa
AA seq
DB search
MGKPMPRVLILLFLLSVLTMVFITKWGLVMDNISTSAPQQTRHTRELFQAAIEESEKRHQ
TRIEELQKKIEELQELLDSQRQQRENLTVKVNESERADGEIQRYFHDKLHSAEILHGVEM
KNEYELTAFNRFTLYRVYVVDPGLGKRVVEKPIGAKKRDLLEVITFSVNILNEQRKNASK
VYTISDFIEGIYRTDPASGTHYDLYFRNLNASQAGHYSKVVVLKPFGPLIPAINTTVQTK
ETWINIILPLKGRLDSLEIFMKNFVDVCILIDKRIYLSIVYFGKEGLNEVRNITKTVSRT
HGYKFIRVISVNEEFSRGRGLQVGMENWKGKDILVFMCDVDIVFNSEFLERCRLNTEKQR
KVYYPIVFSLFNPNLVYSLENKTIPSLRRQLVISKTSGFWRDFGYGMTCQYLSDFKAVQG
FSEGIVGWGGEDVFLYKKYVRSSIAVVRATDPGIFHLWHDKECPQSLSADQYRGCIRSKS
LSEASHAQLGVLAFKNQIDLQKLQAKN
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggggaagccaatgccccgagttctcatccttctcttccttctgtccgtgttaaccatg
gtgttcatcacaaaatggggactcgtgatggacaatatctccaccagcgctccgcagcaa
actcgccacactagggagctgtttcaagccgccatagaagagtcggaaaaacgccaccag
accaggatagaggaactccagaaaaaaatcgaggagttacaggagcttttggattcccag
agacaacagcgagagaatctgaccgtaaaagtgaacgagtcggagagagcagacggtgaa
atacaaagatacttccacgataaacttcattctgcagaaattttacatggagtggaaatg
aaaaatgagtacgagttgactgcatttaacaggttcaccctgtaccgtgtttatgtggtg
gatccagggttaggaaagcgagtggtggagaaaccgattggggccaaaaagagggacctg
ctagaggtcatcacgttcagtgtcaacattctcaacgagcagagaaaaaatgcatccaaa
gtgtacactataagtgactttatagagggaatttacaggacagaccctgcctcagggacc
cactatgatctttatttcagaaacttgaatgcaagtcaggcagggcattactctaaggtg
gtggttctcaaaccctttggtccgttgataccagccataaacacaaccgttcaaaccaaa
gaaacttggattaatattatactgccattaaaaggaagattagactcattagaaatattc
atgaaaaactttgttgatgtttgtattttgatagacaaacgtatctatttaagtattgtt
tattttggtaaggaagggttaaatgaagttagaaatataacaaaaactgtaagtcgtacg
catggatataagttcatcagggtcattagtgtgaatgaggagttttcccgtgggcggggg
ctccaagtggggatggagaactggaagggcaaggacatcctggtgtttatgtgtgacgtg
gacattgtattcaactcggaattcctggagaggtgtcgcctcaacacggaaaaacagagg
aaggtctactacccaatagtgttcagtctgttcaatcccaacctggtttattccctggaa
aataagactataccttcacttaggaggcagctagtcatatccaagacatcgggattctgg
cgggatttcggttatggaatgacctgtcagtatctgtctgattttaaagctgttcaaggc
ttcagtgaggggattgtgggatggggtggggaggatgtgtttttgtataaaaagtatgtc
cgcagcagtattgcagtagtacgggccacagatcctgggattttccacctgtggcacgac
aaggagtgtccccagagcctgtccgctgaccagtaccgaggctgtataaggtccaagtcg
ctaagcgaagcctcccatgcacagctaggggtactggccttcaaaaaccagatagacctc
cagaagctccaagcaaagaattag
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