Crassostrea virginica (eastern oyster): 111121715
Help
Entry
111121715 CDS
T09197
Name
(RefSeq) DNA repair and recombination protein RAD54B-like isoform X1
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
cvn
Crassostrea virginica (eastern oyster)
Pathway
cvn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cvn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111121715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvn03400
]
111121715
DNA repair and recombination proteins [BR:
cvn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
111121715
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
SWI2_SNF2
ZGRF1-like_N
AAA_22
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
111121715
NCBI-ProteinID:
XP_022318804
UniProt:
A0A8B8CUA8
LinkDB
All DBs
Position
2:1667924..1680158
Genome browser
AA seq
886 aa
AA seq
DB search
MRRSAAPSQGSQAKRPRFNVPFKTPCQSEPAPVPLEAPKRDIILTPKLSANKITTQASNE
TKDKSEKGFTRCLSNNAPVDKKESGIISQENCAKPCRYFAVMWCKLSKKKHKKWEGDAVL
VTQGRNATLYDIEGKVIGKATGYKCTELEALKEDESLTVGGKEIQVMSLMTEDHFKSGKC
FSFFEGTVKEPTVPERNIVPIAEKSFVNPLKGESASMTTSYCTTPRHDPSAPDALVMPRP
NAAHQWHHNKKGLPLVDVVVDPYLSVHLRPHQREGVTFLYECVMGFRNLSGRGAILADDM
GLGKTLQCLSLIWTLYKQGPYSGKPIIKRALIITPGSLVKNWFLEIKKWLGTERLRAFAV
SSDNRIEEFLNTSIYPIVIISYEMFVRVYEKLQSLQFDIIICDEGHRLKNNNIKTTSLIA
SLPTQRRVVLTGTPIQNDLQEFFSIVEFCNPGLLGSSASFKRVFENPIVASRQPNASAED
LELGAERGSELSRITKQFVLRRTKDINTKYLPPKCEIVLFCKPSDLQLRLYCQMLQGKMF
RSCLRSDGATHLVCIGALTKLCNHPSLIFSKATQAEECPEDIEEVKIQQVDSVYSGLFPI
FPPGYKEEMYAVHHAGKLKVLSEILAQIHEVSEKIVIVSNHTKTLDILQQFCSNCGYGFL
RLDGQTSTNIRQEIVTKFNSKHSVEKVFLLSSKAGGVGLNLIGASRLLLYDIDWNPANDL
QAMARVWRDGQKRKIYIYRLLTTGTIEEKIYQRQISKQGLSGAIMDLKKKREAQFSLEEL
GDLFSLNEDTECDTHDLLKCHCDGQGETGASLGIPPPQTERSCQLGAVPTAQKSKTLGME
ELLDWKHISGDKLQEKKDWLLGDAHSCVTFGFWQETNKEKTATSEM
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgaggagatctgccgccccaagccaagggtcacaagccaaacgacccaggtttaatgtt
cctttcaaaaccccctgtcagtctgaaccagcgccagtaccactggaggcccccaaaagg
gacatcattttgactccaaaattgtcagcaaataaaataaccacacaagcttcaaatgaa
acaaaagacaaaagtgagaagggtttcactagatgcttgtcaaacaatgcacctgttgat
aagaaggaatctggcatcattagtcaagagaattgtgccaaaccatgcagatattttgct
gttatgtggtgtaagctgtcaaagaaaaagcataaaaagtgggaaggggatgctgttttg
gtaacccaaggaagaaatgctacactgtatgatattgagggaaaagtaataggtaaagcg
acagggtacaaatgtacggagctggaggccctgaaagaggatgagagtttgacggtaggg
gggaaggaaatacaggttatgtcactaatgactgaggatcacttcaaatctgggaaatgt
ttttctttctttgaaggaacggttaaggaaccaacagttccagaaagaaatattgtgcca
attgctgagaaaagttttgttaaccctctgaaaggagaaagtgcatcgatgactacttcc
tactgtacaaccccacgacatgacccatcagcccctgatgcccttgtcatgcccagacct
aatgcagctcaccagtggcaccacaacaagaagggcctccctttagtggatgtggtggtg
gatccgtacctctctgttcacctccgacctcaccagagagagggcgtcacgtttctgtac
gagtgcgtaatgggattcaggaacctgtcaggcaggggagccatcttggctgatgatatg
gggcttgggaaaacactacagtgtctttctctgatctggacattatataaacaaggacct
tatagtggaaaacctatcataaagagagcactgatcattactccaggcagtctagtcaaa
aactggtttctagagattaagaagtggctgggaacagagagactgagagcctttgctgtc
agctcagacaacagaattgaggaattcctaaatacctccatatatccaattgtgataatc
tcttatgagatgtttgtaagagtttatgagaagctgcagtccttgcagtttgatattatt
atctgtgatgaaggacaccggctgaagaataataatatcaaaactacttctttaattgcc
agcctgcctacacagaggcgggtggtgttaacaggaactcctatacagaatgacctgcaa
gagttcttctccatcgtggaattctgcaatccaggattacttggatcatctgcatctttc
aaaagagtttttgagaacccaattgttgcctctcgtcagccgaatgcttcagctgaagac
ctggagttaggagcagagaggggaagtgaactcagtcgtatcactaagcaatttgtcctt
agaagaactaaagacatcaacacaaaatacttgcctccaaaatgtgagatagtattattc
tgtaagccctcggacctacagctgagattgtactgccaaatgctgcaggggaagatgttt
cgctcctgcctcaggagtgatggagccactcatctggtctgcattggagccttgacaaaa
ctgtgtaaccatcccagtctgatcttctccaaagccactcaggccgaggaatgcccggag
gacattgaagaggtgaaaatacaacaagtggattctgtgtacagcggtctcttccccata
tttccacctggctataaggaagaaatgtatgctgttcaccatgctgggaaattaaaagtg
ctttccgaaattcttgcccaaatacacgaagtctcagaaaagatagtaattgtctccaac
catacaaagaccttggatattctacaacagttttgttccaattgcggctatggcttcttg
agattagatggacagacttcaacaaatattcgacaagaaattgtgaccaagttcaacagc
aaacatagtgtagaaaaggtgtttctactaagctcaaaagcagggggagttggtttgaac
cttattggagcttctcgcctactgttatatgacatcgattggaaccctgccaatgacctt
caggccatggccagagtgtggagagatggacagaagaggaaaatctatatttacagactt
cttacaactgggaccattgaggagaagatttaccagcgtcagatcagtaaacaggggctg
agtggggcaatcatggacctcaagaagaagagggaagctcagttctctctagaggaactc
ggagatttattttctctaaatgaggatacagagtgtgatacacatgacctccttaagtgt
cactgtgatggacagggagagacaggtgcttctctgggtatccccccaccccagacagaa
aggtcatgtcagctaggagcagtccctactgctcagaagagcaagactcttggaatggag
gaacttttagactggaaacacatctctggagacaagttacaggagaagaaggactggtta
cttggagatgcccactcttgtgttacatttggcttttggcaggaaaccaacaaagaaaag
actgcaacaagtgaaatgtga
DBGET
integrated database retrieval system
